[←][→] ath   At4g24580 Gene
functional annotation
Function   Rho GTPase activation protein (RhoGAP) with PH domain-containing protein    Plant GARDEN Plant GARDEN JBrowse
GO BP
GO:0035024 [list] [network] negative regulation of Rho protein signal transduction  (1 genes)  IMP  
GO:0009865 [list] [network] pollen tube adhesion  (2 genes)  IMP  
GO:0090630 [list] [network] activation of GTPase activity  (2 genes)  IDA  
GO:0043547 [list] [network] positive regulation of GTPase activity  (16 genes)  IDA  
GO:0009846 [list] [network] pollen germination  (80 genes)  IMP  
GO:0009860 [list] [network] pollen tube growth  (149 genes)  IMP  
GO:0048868 [list] [network] pollen tube development  (226 genes)  IMP  
GO:0007165 [list] [network] signal transduction  (2054 genes)  IEA ISS  
GO CC
GO:0070382 [list] [network] exocytic vesicle  (2 genes)  IDA  
GO:0030139 [list] [network] endocytic vesicle  (8 genes)  IDA  
GO:0016324 [list] [network] apical plasma membrane  (24 genes)  IDA  
GO:0045177 [list] [network] apical part of cell  (27 genes)  IDA  
GO:0005938 [list] [network] cell cortex  (72 genes)  IDA  
GO:0090406 [list] [network] pollen tube  (97 genes)  IDA  
GO:0005634 [list] [network] nucleus  (10305 genes)  ISM  
GO MF
GO:0031267 [list] [network] small GTPase binding  (18 genes)  IPI  
GO:0005096 [list] [network] GTPase activator activity  (21 genes)  IDA  
GO:0035091 [list] [network] phosphatidylinositol binding  (94 genes)  ISS  
KEGG
Protein NP_001320057.1  NP_001329908.1  NP_001329909.1 
BLAST NP_001320057.1  NP_001329908.1  NP_001329909.1 
Orthologous [Ortholog page] AT5G12150 (ath)  AT5G19390 (ath)  LOC4344163 (osa)  LOC7454873 (ppo)  LOC7461814 (ppo)  LOC7463885 (ppo)  LOC7468863 (ppo)  LOC9271710 (osa)  LOC11426845 (mtr)  LOC11429663 (mtr)  LOC11431858 (mtr)  LOC100796201 (gma)  LOC100817373 (gma)  LOC100817923 (gma)  LOC100820132 (gma)  LOC101245542 (sly)  LOC101260369 (sly)  LOC101260991 (sly)  LOC103834902 (bra)  LOC103845758 (bra)  LOC103846662 (bra)  LOC103851270 (bra)  LOC103861494 (bra)  LOC103862294 (bra)  LOC120580197 (mtr)  LOC123043872 (tae)  LOC123051746 (tae)  LOC123086113 (tae)  LOC123091955 (tae)  LOC123097416 (tae)  LOC123187660 (tae)  LOC123424924 (hvu)  LOC123448582 (hvu) 
Subcellular
localization
wolf
nucl 9,  cyto_nucl 5  (predict for NP_001320057.1)
nucl 9,  cyto_nucl 5  (predict for NP_001329908.1)
nucl 9,  cyto_nucl 5  (predict for NP_001329909.1)
Subcellular
localization
TargetP
other 5  (predict for NP_001320057.1)
other 5  (predict for NP_001329908.1)
other 5  (predict for NP_001329909.1)
Gene coexpression
Network*for
coexpressed
genes
LCNloc
[Cytoscape]
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ath04144 Endocytosis 2
Genes directly connected with REN1 on the network
coex z* Locus Function* Coexpression
detail		 Entrez Gene ID*
6.9 RIC1 ROP-interactive CRIB motif-containing protein 1 [detail] 817911
6.3 AT1G04700 PB1 domain-containing protein tyrosine kinase [detail] 839437
6.3 AT2G28440 proline-rich family protein [detail] 817392
5.5 AT2G37670 Transducin/WD40 repeat-like superfamily protein [detail] 818344
4.1 AT4G27480 Core-2/I-branching beta-1,6-N-acetylglucosaminyltransferase family protein [detail] 828857
Coexpressed
gene list		 [Coexpressed gene list for REN1]
Gene expression
All samples [Expression pattern for all samples]
AtGenExpress*
(Development)
254173_at
254173_at.png

X axis is samples (pdf file), and Y axis is log2-expression.
"1st Q", "mean" and "3rd Q" indecate the values for all genes on a GeneChip. Q: quartile.

AtGenExpress*
(Stress)
254173_at
254173_at.png

X axis is samples (pdf file), and Y axis is log2-expression.
AtGenExpress*
(Hormone)
254173_at
254173_at.png

X axis is samples (xls file), and Y axis is log-expression.
Link to other DBs
Entrez Gene ID 828560      
Refseq ID (protein) NP_001320057.1 
NP_001329908.1 
NP_001329909.1 


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