[][] ath   At4g25100 Gene
functional annotation
Function   Fe superoxide dismutase 1 Plant GARDENPlant GARDEN JBrowse
GO BP
GO:0019430 [list] [network] removal of superoxide radicals  (7 genes)  IC  
GO:0046688 [list] [network] response to copper ion  (25 genes)  IEP  
GO:0010193 [list] [network] response to ozone  (36 genes)  IEP  
GO:0046686 [list] [network] response to cadmium ion  (90 genes)  IEP  
GO:0007623 [list] [network] circadian rhythm  (123 genes)  IEP  
GO:0009642 [list] [network] response to light intensity  (373 genes)  IEP  
GO CC
GO:0009579 [list] [network] thylakoid  (509 genes)  HDA  
GO:0009941 [list] [network] chloroplast envelope  (582 genes)  HDA  
GO:0009570 [list] [network] chloroplast stroma  (705 genes)  HDA  
GO:0005886 [list] [network] plasma membrane  (2529 genes)  HDA  
GO:0005829 [list] [network] cytosol  (2559 genes)  HDA RCA  
GO:0005739 [list] [network] mitochondrion  (4228 genes)  HDA ISM  
GO:0009507 [list] [network] chloroplast  (5004 genes)  HDA IDA ISM NAS  
GO:0005737 [list] [network] cytoplasm  (13880 genes)  IDA  
GO MF
GO:0004784 [list] [network] superoxide dismutase activity  (10 genes)  IDA IEA IMP  
GO:0005507 [list] [network] copper ion binding  (132 genes)  HDA  
KEGG ath04146 [list] [network] Peroxisome (88 genes)
Protein NP_001031710.1  NP_001190834.1  NP_194240.1  NP_849440.1  NP_849441.1 
BLAST NP_001031710.1  NP_001190834.1  NP_194240.1  NP_849440.1  NP_849441.1 
Orthologous [Ortholog page] FESOD (sly)SODB2 (gma)SODB (gma)FSD2 (ath)LOC4339922 (osa)LOC7456676 (ppo)LOC18103839 (ppo)LOC25483199 (mtr)LOC100813221 (gma)LOC100814802 (gma)LOC101248277 (sly)LOC103857203 (bra)FSD1 (bra)LOC123151939 (tae)
Subcellular
localization
wolf
cyto_nucl 3,  nucl 3,  cyto 3,  nucl_plas 2  (predict for NP_001031710.1)
chlo 4,  cyto 3,  cyto_E.R. 2,  nucl 1,  nucl_plas 1  (predict for NP_001190834.1)
chlo 4,  cyto 3,  cyto_E.R. 2,  nucl 1,  nucl_plas 1  (predict for NP_194240.1)
chlo 4,  cyto 3,  cyto_E.R. 2,  nucl 1,  nucl_plas 1  (predict for NP_849440.1)
chlo 4,  cyto 3,  cyto_E.R. 2,  nucl 1,  nucl_plas 1  (predict for NP_849441.1)
Subcellular
localization
TargetP
other 8  (predict for NP_001031710.1)
other 4,  scret 4  (predict for NP_001190834.1)
other 4,  scret 4  (predict for NP_194240.1)
other 4,  scret 4  (predict for NP_849440.1)
other 4,  scret 4  (predict for NP_849441.1)
Gene coexpression
Network*for
coexpressed
genes
LCNloc
[Cytoscape]
Genes directly connected with FSD1 on the network
coex z* Locus Function* CoexViewer Entrez Gene ID*
11.1 YSL2 YELLOW STRIPE like 2 [detail] 832509
9.4 CCH copper chaperone [detail] 824790
6.9 ZIP2 ZRT/IRT-like protein 2 [detail] 836071
4.6 YSL3 YELLOW STRIPE like 3 [detail] 835437
Coexpressed
gene list
[Coexpressed gene list for FSD1]
Gene expression
All samples [Expression pattern for all samples]
AtGenExpress*
(Development)
254098_at
254098_at.png

X axis is samples (pdf file), and Y axis is log2-expression.
"1st Q", "mean" and "3rd Q" indecate the values for all genes on a GeneChip. Q: quartile.

AtGenExpress*
(Stress)
254098_at
254098_at.png

X axis is samples (pdf file), and Y axis is log2-expression.

AtGenExpress*
(Hormone)
254098_at
254098_at.png

X axis is samples (xls file), and Y axis is log-expression.

Link to other DBs
Entrez Gene ID 828613    
Refseq ID (protein) NP_001031710.1 
NP_001190834.1 
NP_194240.1 
NP_849440.1 
NP_849441.1 


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