ATTED-II : GeneID search result

[←][→] ath AT4G25320 Gene

functional annotation

Function

AT hook motif DNA-binding family protein

GO BP

GO:0010089 [list] [network] xylem development	(42 genes)	IMP
GO:0010051 [list] [network] xylem and phloem pattern formation	(73 genes)	IMP

GO CC

GO:0005634 [list] [network] nucleus

(10793 genes)

IDA ISM

GO MF

GO:0003680 [list] [network] AT DNA binding	(27 genes)	IEA
GO:0043621 [list] [network] protein self-association	(96 genes)	IDA
GO:0005515 [list] [network] protein binding	(4605 genes)	IPI

KEGG

Protein

NP_194262.1

BLAST

NP_194262.1

Orthologous

[Ortholog page] AT5G51590 (ath) LOC103857173 (bra) LOC103861546 (bra) LOC103863132 (bra)

Subcellular
localization
wolf

nucl 7, vacu 1, plas 1, E.R._vacu 1, cyto_pero 1

(predict for NP_194262.1)

Subcellular
localization
TargetP

other 8, chlo 3

(predict for NP_194262.1)

Gene coexpression

Network^*for
coexpressed
genes

[Cytoscape]

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
ath03018	RNA degradation	3
ath03013	RNA transport	2

Genes directly connected with AT4G25320 on the network
coex z^*	Locus	Function^*	Coexpression detail	Entrez Gene ID^*
6.1	AT3G61240	DEA(D/H)-box RNA helicase family protein	[detail]	825296
5.7	AT5G51590	AT hook motif DNA-binding family protein	[detail]	835233
5.4	AT1G77610	EamA-like transporter family protein	[detail]	844096

Coexpressed
gene list

[Coexpressed gene list for AT4G25320]

Gene expression

All samples

[Expression pattern for all samples]

AtGenExpress^*
(Development)

254054_at

X axis is samples (pdf file), and Y axis is log2-expression.
"1st Q", "mean" and "3rd Q" indecate the values for all genes on a GeneChip. Q: quartile.

AtGenExpress^*
(Stress)

254054_at

X axis is samples (pdf file), and Y axis is log2-expression.

AtGenExpress^*
(Hormone)

254054_at

X axis is samples (xls file), and Y axis is log-expression.

Link to other DBs
Entrez Gene ID	828635
Refseq ID (protein)	NP_194262.1

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