[←][→] ath   AT4G25520 Gene
functional annotation
Function   SEUSS-like 1  
GO BP
GO:1901001 [list] [network] negative regulation of response to salt stress  (11 genes)  IMP  
GO:0047484 [list] [network] regulation of response to osmotic stress  (34 genes)  IMP  
GO:0000122 [list] [network] negative regulation of transcription by RNA polymerase II  (45 genes)  IBA  
GO:0048481 [list] [network] plant ovule development  (57 genes)  IMP  
GO:0048467 [list] [network] gynoecium development  (91 genes)  IMP  
GO:0045944 [list] [network] positive regulation of transcription by RNA polymerase II  (206 genes)  IBA  
GO:0045892 [list] [network] negative regulation of transcription, DNA-templated  (253 genes)  IBA  
GO:0009793 [list] [network] embryo development ending in seed dormancy  (547 genes)  IMP  
GO:0030154 [list] [network] cell differentiation  (695 genes)  IEA  
GO:0007275 [list] [network] multicellular organism development  (2714 genes)  IBA  
GO CC
GO:0005667 [list] [network] transcription factor complex  (106 genes)  IBA  
GO:0005634 [list] [network] nucleus  (10793 genes)  IBA ISM  
GO MF
GO:0001102 [list] [network] RNA polymerase II activating transcription factor binding  (4 genes)  IBA  
GO:0005515 [list] [network] protein binding  (4605 genes)  IPI  
KEGG
Protein NP_001320064.1  NP_194282.2 
BLAST NP_001320064.1  NP_194282.2 
Orthologous [Ortholog page] LOC547529 (gma)  SLK3 (ath)  SLK2 (ath)  LOC4339967 (osa)  LOC100254797 (vvi)  LOC100265879 (vvi)  LOC100280226 (zma)  LOC100383356 (zma)  LOC100502315 (zma)  LOC100789452 (gma)  LOC100816886 (gma)  SEU2 (sly)  LOC103834866 (bra)  LOC103854973 (bra)  LOC103861563 (bra)  LOC103861564 (bra) 
Subcellular
localization
wolf
nucl 6,  cyto 4  (predict for NP_001320064.1)
nucl 6,  cyto 4  (predict for NP_194282.2)
Subcellular
localization
TargetP
chlo 6  (predict for NP_001320064.1)
chlo 6  (predict for NP_194282.2)
Gene coexpression
Network*for
coexpressed
genes
LCNloc
[Cytoscape]
Genes directly connected with SLK1 on the network
coex z* Locus Function* Coexpression
detail		 Entrez Gene ID*
6.8 AT5G41580 RING/U-box superfamily protein [detail] 834160
6.2 AT1G21610 wound-responsive family protein [detail] 838762
6.1 PFT1 phytochrome and flowering time regulatory protein (PFT1) [detail] 839141
5.6 SLK2 SEUSS-like 2 [detail] 836329
5.5 SLK3 SEUSS-like 3 [detail] 828656
Coexpressed
gene list		 [Coexpressed gene list for SLK1]
Gene expression
All samples [Expression pattern for all samples]
AtGenExpress*
(Development)
245237_at
245237_at.png

X axis is samples (pdf file), and Y axis is log2-expression.
"1st Q", "mean" and "3rd Q" indecate the values for all genes on a GeneChip. Q: quartile.

AtGenExpress*
(Stress)
245237_at
245237_at.png

X axis is samples (pdf file), and Y axis is log2-expression.
AtGenExpress*
(Hormone)
245237_at
245237_at.png

X axis is samples (xls file), and Y axis is log-expression.
Link to other DBs
Entrez Gene ID 828657      
Refseq ID (protein) NP_001320064.1 
NP_194282.2 


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