[←][→] ath   AT4G25600 Gene
functional annotation
Function   Oxoglutarate/iron-dependent oxygenase  
GO BP
GO:0018401 [list] [network] peptidyl-proline hydroxylation to 4-hydroxy-L-proline  (12 genes)  IBA  
GO:0055114 [list] [network] oxidation-reduction process  (1468 genes)  IEA  
GO CC
GO:0005789 [list] [network] endoplasmic reticulum membrane  (466 genes)  IEA  
GO:0005783 [list] [network] endoplasmic reticulum  (877 genes)  IBA  
GO:0005576 [list] [network] extracellular region  (3363 genes)  ISM  
GO:0016021 [list] [network] integral component of membrane  (4803 genes)  IEA  
GO:0009507 [list] [network] chloroplast  (5095 genes)  ISM  
GO MF
GO:0004656 [list] [network] procollagen-proline 4-dioxygenase activity  (12 genes)  IBA  
GO:0031418 [list] [network] L-ascorbic acid binding  (23 genes)  IEA  
GO:0005506 [list] [network] iron ion binding  (281 genes)  IEA  
KEGG ath00330 [list] [network] Arginine and proline metabolism (54 genes)
Protein NP_001329145.1  NP_001329146.1  NP_001329147.1  NP_194290.2 
BLAST NP_001329145.1  NP_001329146.1  NP_001329147.1  NP_194290.2 
Orthologous [Ortholog page] LOC7482077 (ppo)  LOC25496532 (mtr)  LOC100254198 (vvi)  LOC100775928 (gma)  LOC100795761 (gma)  LOC101255367 (sly)  LOC103861577 (bra)  LOC103863344 (bra) 
Subcellular
localization
wolf
chlo 6,  nucl 4  (predict for NP_001329145.1)
chlo 7,  nucl 2  (predict for NP_001329146.1)
chlo 8,  nucl 1  (predict for NP_001329147.1)
chlo 9,  extr 1  (predict for NP_194290.2)
Subcellular
localization
TargetP
other 7  (predict for NP_001329145.1)
mito 6  (predict for NP_001329146.1)
other 6  (predict for NP_001329147.1)
chlo 6,  scret 4  (predict for NP_194290.2)
Gene coexpression
Network*for
coexpressed
genes
LCNloc
[Cytoscape]
Genes directly connected with AT4G25600 on the network
coex z* Locus Function* Coexpression
detail		 Entrez Gene ID*
6.0 AT1G21560 hypothetical protein [detail] 838757
5.2 AT4G02485 2-oxoglutarate (2OG) and Fe(II)-dependent oxygenase superfamily protein [detail] 827953
5.1 AtPOT1a Nucleic acid-binding, OB-fold-like protein [detail] 815069
5.0 SAMC2 S-adenosylmethionine carrier 2 [detail] 840304
Coexpressed
gene list		 [Coexpressed gene list for AT4G25600]
Gene expression
All samples [Expression pattern for all samples]
AtGenExpress*
(Development)
245231_at
245231_at.png

X axis is samples (pdf file), and Y axis is log2-expression.
"1st Q", "mean" and "3rd Q" indecate the values for all genes on a GeneChip. Q: quartile.

AtGenExpress*
(Stress)
245231_at
245231_at.png

X axis is samples (pdf file), and Y axis is log2-expression.
AtGenExpress*
(Hormone)
245231_at
245231_at.png

X axis is samples (xls file), and Y axis is log-expression.
Link to other DBs
Entrez Gene ID 828665      
Refseq ID (protein) NP_001329145.1 
NP_001329146.1 
NP_001329147.1 
NP_194290.2 


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