ATTED-II : GeneID search result

[←][→] ath AT4G26140 Gene

functional annotation

Function

beta-galactosidase 12

GO BP

GO:0005975 [list] [network] carbohydrate metabolic process

(995 genes)

IEA

GO CC

GO:0048046 [list] [network] apoplast	(443 genes)	IEA
GO:0005618 [list] [network] cell wall	(685 genes)	IBA IDA
GO:0005773 [list] [network] vacuole	(1133 genes)	IBA
GO:0005576 [list] [network] extracellular region	(3363 genes)	ISM
GO:0005829 [list] [network] cytosol	(3506 genes)	HDA

GO MF

GO:0004565 [list] [network] beta-galactosidase activity

(16 genes)

IBA

KEGG

Protein

NP_001329554.1 NP_001329555.1 NP_001329556.1 NP_001329557.1 NP_001329558.1 NP_001329559.1 NP_001329560.1 NP_194344.2 NP_849553.1

BLAST

NP_001329554.1 NP_001329555.1 NP_001329556.1 NP_001329557.1 NP_001329558.1 NP_001329559.1 NP_001329560.1 NP_194344.2 NP_849553.1

Orthologous

[Ortholog page] TBG3 (sly) TBG4 (sly) TBG1 (sly) BGAL1 (ath) BGAL2 (ath) BGAL4 (ath) LOC4324191 (osa) LOC4328745 (osa) LOC4341358 (osa) LOC7497590 (ppo) LOC11414214 (mtr) LOC11441599 (mtr) LOC11441981 (mtr) LOC25500443 (mtr) LOC100191631 (zma) LOC100259328 (vvi) LOC100265181 (vvi) LOC100272556 (zma) LOC100781074 (gma) LOC100781959 (gma) LOC100785688 (gma) LOC100787084 (gma) LOC100792629 (gma) LOC100810170 (gma) LOC100811187 (gma) LOC101258163 (sly) LOC103654804 (zma) LOC103842580 (bra) LOC103851804 (bra) LOC103856789 (bra) LOC103861613 (bra) LOC103863929 (bra) LOC103870099 (bra) LOC103872148 (bra) LOC106795462 (gma)

Subcellular
localization
wolf

vacu 3, E.R. 2, chlo 1, golg 1, E.R._plas 1	(predict for NP_001329554.1)
chlo 4, vacu 2, extr 1, golg 1, nucl 1, plas 1, nucl_plas 1	(predict for NP_001329555.1)
chlo 3, vacu 2, plas 1, E.R. 1, chlo_mito 1, E.R._plas 1	(predict for NP_001329556.1)
vacu 3, E.R. 2, chlo 1, golg 1, E.R._plas 1	(predict for NP_001329557.1)
vacu 3, chlo 2, E.R._vacu 2, plas 1, E.R. 1, E.R._plas 1	(predict for NP_001329558.1)
vacu 3, chlo 2, E.R._vacu 2, plas 1, E.R. 1, E.R._plas 1	(predict for NP_001329559.1)
chlo 3, vacu 3, E.R. 1, chlo_mito 1, nucl 1, plas 1, extr 1, golg 1, nucl_plas 1, golg_plas 1, cyto_E.R. 1	(predict for NP_001329560.1)
chlo 3, vacu 3, E.R. 1, chlo_mito 1, nucl 1, plas 1, extr 1, golg 1, nucl_plas 1, golg_plas 1, cyto_E.R. 1	(predict for NP_194344.2)
chlo 4, vacu 1, E.R. 1, golg 1, E.R._vacu 1	(predict for NP_849553.1)

Subcellular
localization
TargetP

scret 8	(predict for NP_001329554.1)
scret 8	(predict for NP_001329555.1)
scret 8	(predict for NP_001329556.1)
scret 8	(predict for NP_001329557.1)
scret 8	(predict for NP_001329558.1)
scret 8	(predict for NP_001329559.1)
scret 8	(predict for NP_001329560.1)
scret 8	(predict for NP_194344.2)
scret 8	(predict for NP_849553.1)

Gene coexpression

Network^*for
coexpressed
genes

[Cytoscape]

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
ath00940	Phenylpropanoid biosynthesis	2

Genes directly connected with BGAL12 on the network
coex z^*	Locus	Function^*	Coexpression detail	Entrez Gene ID^*
5.8	PRR1	pinoresinol reductase 1	[detail]	840102
4.7	AT1G03920	Protein kinase family protein	[detail]	839369
4.3	AT2G22620	Rhamnogalacturonate lyase family protein	[detail]	816793

Coexpressed
gene list

[Coexpressed gene list for BGAL12]

Gene expression

All samples

[Expression pattern for all samples]

AtGenExpress^*
(Development)

254015_at

X axis is samples (pdf file), and Y axis is log2-expression.
"1st Q", "mean" and "3rd Q" indecate the values for all genes on a GeneChip. Q: quartile.

AtGenExpress^*
(Stress)

254015_at

X axis is samples (pdf file), and Y axis is log2-expression.

AtGenExpress^*
(Hormone)

254015_at

X axis is samples (xls file), and Y axis is log-expression.

Link to other DBs
Entrez Gene ID	828720
Refseq ID (protein)	NP_001329554.1
	NP_001329555.1
	NP_001329556.1
	NP_001329557.1
	NP_001329558.1
	NP_001329559.1
	NP_001329560.1
	NP_194344.2
	NP_849553.1

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