[←][→] ath   At4g27490 Gene
functional annotation
Function   3'-5'-exoribonuclease family protein    Plant GARDEN Plant GARDEN JBrowse
GO BP
GO:0009845 [list] [network] seed germination  (99 genes)  IMP  
GO:0090351 [list] [network] seedling development  (123 genes)  IMP  
GO CC
GO:0009507 [list] [network] chloroplast  (5004 genes)  ISM  
GO:0005634 [list] [network] nucleus  (10305 genes)  IDA  
GO:0005737 [list] [network] cytoplasm  (13880 genes)  IDA  
GO MF
GO:0008408 [list] [network] 3'-5' exonuclease activity  (18 genes)  IMP  
KEGG ath03018 [list] [network] RNA degradation (113 genes)
Protein NP_001320075.1  NP_001328238.1  NP_001328239.1  NP_001328240.1  NP_001328241.1  NP_001328242.1  NP_001328243.1 
BLAST NP_001320075.1  NP_001328238.1  NP_001328239.1  NP_001328240.1  NP_001328241.1  NP_001328242.1  NP_001328243.1 
Orthologous [Ortholog page] LOC4344519 (osa)  LOC7491150 (ppo)  LOC9269241 (osa)  LOC11410037 (mtr)  LOC18098212 (ppo)  LOC100816271 (gma)  LOC100819105 (gma)  LOC101260939 (sly)  LOC103867212 (bra)  LOC123044104 (tae)  LOC123051987 (tae)  LOC123187854 (tae)  LOC123425183 (hvu) 
Subcellular
localization
wolf
chlo 7,  nucl 1,  mito 1,  extr 1,  E.R. 1  (predict for NP_001320075.1)
chlo 7,  nucl 1,  mito 1,  extr 1,  E.R. 1  (predict for NP_001328238.1)
chlo 7,  plas 1,  mito 1,  extr 1,  nucl_plas 1,  golg_plas 1,  cysk_plas 1,  E.R._plas 1,  cyto_plas 1  (predict for NP_001328239.1)
chlo 7,  plas 1,  mito 1,  extr 1,  nucl_plas 1,  golg_plas 1,  cysk_plas 1,  E.R._plas 1,  cyto_plas 1  (predict for NP_001328240.1)
chlo 7,  nucl 1,  mito 1,  extr 1,  E.R. 1  (predict for NP_001328241.1)
chlo 4,  E.R. 3,  nucl 1,  cyto_E.R. 1  (predict for NP_001328242.1)
chlo 7,  plas 1,  mito 1,  extr 1,  nucl_plas 1,  golg_plas 1,  cysk_plas 1,  E.R._plas 1,  cyto_plas 1  (predict for NP_001328243.1)
Subcellular
localization
TargetP
other 4,  chlo 4  (predict for NP_001320075.1)
other 4,  chlo 4  (predict for NP_001328238.1)
other 4,  chlo 4  (predict for NP_001328239.1)
other 4,  chlo 4  (predict for NP_001328240.1)
other 4,  chlo 4  (predict for NP_001328241.1)
scret 4  (predict for NP_001328242.1)
other 4,  chlo 4  (predict for NP_001328243.1)
Gene coexpression
Network*for
coexpressed
genes
LCNloc
[Cytoscape]
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ath03018 RNA degradation 5
Genes directly connected with RRP41L on the network
coex z* Locus Function* CoexViewer Entrez Gene ID*
9.3 AT3G07750 3'-5'-exoribonuclease family protein [detail] 819966
9.3 AT3G46210 Ribosomal protein S5 domain 2-like superfamily protein [detail] 823766
8.6 RRP4 ribosomal RNA processing 4 [detail] 839521
Coexpressed
gene list		 [Coexpressed gene list for RRP41L]
Gene expression
All samples [Expression pattern for all samples]
AtGenExpress*
(Development)
253867_at
253867_at.png

X axis is samples (pdf file), and Y axis is log2-expression.
"1st Q", "mean" and "3rd Q" indecate the values for all genes on a GeneChip. Q: quartile.

AtGenExpress*
(Stress)
253867_at
253867_at.png

X axis is samples (pdf file), and Y axis is log2-expression.
AtGenExpress*
(Hormone)
253867_at
253867_at.png

X axis is samples (xls file), and Y axis is log-expression.
Link to other DBs
Entrez Gene ID 828858      
Refseq ID (protein) NP_001320075.1 
NP_001328238.1 
NP_001328239.1 
NP_001328240.1 
NP_001328241.1 
NP_001328242.1 
NP_001328243.1 


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