ATTED-II : GeneID search result

[←][→] ath At4g27540 Gene

functional annotation

Function

prenylated RAB acceptor 1.H

GO BP

GO:0016192 [list] [network] vesicle-mediated transport

(261 genes)

IDA

GO CC

GO:0005783 [list] [network] endoplasmic reticulum

(856 genes)

IDA

GO MF

KEGG

Protein

NP_001328943.1 NP_567776.1

BLAST

NP_001328943.1 NP_567776.1

Orthologous

[Ortholog page] LOC4346463 (osa) LOC7462316 (ppo) LOC18095548 (ppo) LOC25487299 (mtr) LOC100812581 (gma) LOC101251955 (sly) LOC103852005 (bra) LOC103867262 (bra) LOC123103335 (tae) LOC123111527 (tae) LOC123120784 (tae) LOC123398085 (hvu)

Subcellular
localization
wolf

nucl 4, E.R. 1, E.R._plas 1, cyto 1, plas 1, chlo 1, mito 1, chlo_mito 1, cyto_pero 1	(predict for NP_001328943.1)
vacu 8, plas 1, extr 1, E.R. 1, E.R._plas 1	(predict for NP_567776.1)

Subcellular
localization
TargetP

other 4	(predict for NP_001328943.1)
other 4	(predict for NP_567776.1)

Gene coexpression

Network^*for
coexpressed
genes

[Cytoscape]

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
ath03013	Nucleocytoplasmic transport	2

Genes directly connected with PRA1.H on the network
coex z^*	Locus	Function^*	CoexViewer	Entrez Gene ID^*
5.7	AT4G24880	snurportin-1 protein	[detail]	828590
5.2	AT1G09520	uncharacterized protein	[detail]	837478
5.1	AT1G31220	Formyl transferase	[detail]	840010

Coexpressed
gene list

[Coexpressed gene list for PRA1.H]

Gene expression

All samples

[Expression pattern for all samples]

AtGenExpress^*
(Development)

253873_at

X axis is samples (pdf file), and Y axis is log2-expression.
"1st Q", "mean" and "3rd Q" indecate the values for all genes on a GeneChip. Q: quartile.

AtGenExpress^*
(Stress)

253873_at

X axis is samples (pdf file), and Y axis is log2-expression.

AtGenExpress^*
(Hormone)

253873_at

X axis is samples (xls file), and Y axis is log-expression.

Link to other DBs
Entrez Gene ID	828863
Refseq ID (protein)	NP_001328943.1
Refseq ID (protein)	NP_567776.1

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