[←][→] ath   At4g28760 Gene
functional annotation
Function   methyl-coenzyme M reductase II subunit gamma, putative (DUF3741)      
GO BP
GO:0010629 [list] [network] negative regulation of gene expression  (396 genes)  IEA  
GO:0009908 [list] [network] flower development  (492 genes)  IEA  
GO CC
GO:0005634 [list] [network] nucleus  (10305 genes)  ISM  
GO MF
KEGG
Protein NP_567819.1  NP_974633.1 
BLAST NP_567819.1  NP_974633.1 
Orthologous [Ortholog page] TRM17 (ath)  TRM21 (ath)  LOC4331592 (osa)  LOC4336344 (osa)  LOC7459526 (ppo)  LOC11425227 (mtr)  LOC25484161 (mtr)  LOC100787955 (gma)  LOC100793360 (gma)  LOC100814302 (gma)  LOC100816611 (gma)  TRM17/20b (sly)  TRM17/20a (sly)  LOC103839223 (bra)  LOC103854122 (bra)  LOC123045972 (tae)  LOC123053850 (tae)  LOC123093471 (tae)  LOC123098750 (tae)  LOC123427194 (hvu)  LOC123449683 (hvu) 
Subcellular
localization
wolf
nucl 9,  mito 1,  cysk 1  (predict for NP_567819.1)
nucl 9,  mito 1,  cysk 1  (predict for NP_974633.1)
Subcellular
localization
TargetP
other 6  (predict for NP_567819.1)
other 6  (predict for NP_974633.1)
Gene coexpression
Network*for
coexpressed
genes
LCNloc
[Cytoscape]
Genes directly connected with TRM20 on the network
coex z* Locus Function* CoexViewer Entrez Gene ID*
5.4 TRM4 LONGIFOLIA protein [detail] 843756
5.2 ROPGEF1 rho guanyl-nucleotide exchange factor 1 [detail] 830000
5.0 UBP15 ubiquitin-specific protease 15 [detail] 838281
4.6 HA11 H[+]-ATPase 11 [detail] 836388
Coexpressed
gene list		 [Coexpressed gene list for TRM20]
Gene expression
All samples [Expression pattern for all samples]
AtGenExpress*
(Development)
253739_at
253739_at.png

X axis is samples (pdf file), and Y axis is log2-expression.
"1st Q", "mean" and "3rd Q" indecate the values for all genes on a GeneChip. Q: quartile.

AtGenExpress*
(Stress)
253739_at
253739_at.png

X axis is samples (pdf file), and Y axis is log2-expression.
AtGenExpress*
(Hormone)
253739_at
253739_at.png

X axis is samples (xls file), and Y axis is log-expression.
Link to other DBs
Entrez Gene ID 828997      
Refseq ID (protein) NP_567819.1 
NP_974633.1 


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