| functional annotation |
| Function |
regulatory particle AAA-ATPase 2A |
|
| GO BP |
|
GO:0080129 [list] [network] proteasome core complex assembly
|
(2 genes)
|
IMP
|
 |
|
GO:0010078 [list] [network] maintenance of root meristem identity
|
(12 genes)
|
IMP
|
|
|
GO:0007292 [list] [network] female gamete generation
|
(13 genes)
|
IGI
|
|
|
GO:0043248 [list] [network] proteasome assembly
|
(13 genes)
|
IMP
|
|
|
GO:0048829 [list] [network] root cap development
|
(15 genes)
|
IMP
|
|
|
GO:0035266 [list] [network] meristem growth
|
(18 genes)
|
IMP
|
|
|
GO:0051788 [list] [network] response to misfolded protein
|
(24 genes)
|
IMP
|
|
|
GO:0009933 [list] [network] meristem structural organization
|
(54 genes)
|
IMP
|
|
|
GO:0010311 [list] [network] lateral root formation
|
(55 genes)
|
IMP
|
|
|
GO:0060968 [list] [network] regulation of gene silencing
|
(60 genes)
|
IMP
|
|
|
GO:0048232 [list] [network] male gamete generation
|
(69 genes)
|
IGI
|
|
|
GO:0009965 [list] [network] leaf morphogenesis
|
(96 genes)
|
IMP
|
|
|
GO:0090351 [list] [network] seedling development
|
(115 genes)
|
IMP
|
|
|
GO:0043161 [list] [network] proteasome-mediated ubiquitin-dependent protein catabolic process
|
(188 genes)
|
IMP
|
|
|
GO:0009408 [list] [network] response to heat
|
(229 genes)
|
IMP
|
|
|
GO:0010015 [list] [network] root morphogenesis
|
(254 genes)
|
IMP
|
|
|
GO:0045087 [list] [network] innate immune response
|
(322 genes)
|
IMP
|
|
|
GO:0046686 [list] [network] response to cadmium ion
|
(346 genes)
|
IEP
|
|
|
GO:0006511 [list] [network] ubiquitin-dependent protein catabolic process
|
(436 genes)
|
TAS
|
|
|
GO:0048364 [list] [network] root development
|
(482 genes)
|
IMP
|
|
|
GO:0048827 [list] [network] phyllome development
|
(497 genes)
|
IMP
|
|
|
GO:0048367 [list] [network] shoot system development
|
(812 genes)
|
IMP
|
|
|
| GO CC |
|
| GO MF |
|
GO:0036402 [list] [network] proteasome-activating ATPase activity
|
(3 genes)
|
IBA
|
|
|
GO:0017025 [list] [network] TBP-class protein binding
|
(17 genes)
|
IBA
|
|
|
GO:0016887 [list] [network] ATPase activity
|
(507 genes)
|
IGI
|
|
|
GO:0005524 [list] [network] ATP binding
|
(2003 genes)
|
IEA
|
|
|
| KEGG |
ath03050 [list] [network] Proteasome (60 genes) |
 |
| Protein |
NP_194633.1
|
| BLAST |
NP_194633.1
|
| Orthologous |
[Ortholog page]
RPT2b (ath)
LOC4332553 (osa)
LOC4344373 (osa)
LOC11419485 (mtr)
LOC25484145 (mtr)
LOC100193364 (zma)
LOC100244194 (vvi)
LOC100279843 (zma)
LOC100501403 (zma)
LOC100776168 (gma)
LOC100783293 (gma)
LOC100798835 (gma)
LOC100802442 (gma)
LOC101267617 (sly)
LOC103834733 (bra)
LOC103853882 (bra)
|
Subcellular
localization
wolf |
|
cyto 6,
plas 1,
chlo 1,
nucl 1,
mito 1,
chlo_mito 1,
golg_plas 1,
cysk_plas 1,
E.R._plas 1
|
(predict for NP_194633.1)
|
|
Subcellular
localization
TargetP |
|
other 9
|
(predict for NP_194633.1)
|
|
| Gene coexpression |
Network*for
coexpressed
genes |
| KEGG* ID |
Title |
#genes |
Link to the KEGG* map
(Multiple genes) |
| ath03050 |
Proteasome |
17 |
 |
Genes directly connected with RPT2a on the network
| coex z* |
Locus |
Function* |
Coexpression
detail |
Entrez Gene ID* |
| 13.1 |
AT5G23540 |
Mov34/MPN/PAD-1 family protein |
[detail] |
832420 |
| 11.6 |
RPN10 |
regulatory particle non-ATPase 10 |
[detail] |
830019 |
| 11.0 |
EMB2719 |
PAM domain (PCI/PINT associated module) protein |
[detail] |
838609 |
| 10.8 |
AT5G20000 |
AAA-type ATPase family protein |
[detail] |
832122 |
| 9.8 |
RPT3 |
regulatory particle triple-A ATPase 3 |
[detail] |
835941 |
| 8.4 |
MEE34 |
Mov34/MPN/PAD-1 family protein |
[detail] |
820298 |
| 6.8 |
RPT2b |
AAA-type ATPase family protein |
[detail] |
816533 |
| 4.2 |
AT5G48370 |
Thioesterase/thiol ester dehydrase-isomerase superfamily protein |
[detail] |
834890 |
|
Coexpressed
gene list |
[Coexpressed gene list for RPT2a]
|
| Gene expression |
| All samples |
[Expression pattern for all samples]
|
AtGenExpress*
(Development) |
253755_at
X axis is samples (pdf file), and Y axis is log2-expression.
"1st Q", "mean" and "3rd Q" indecate the values for all genes on a GeneChip. Q: quartile.
|
AtGenExpress*
(Stress) |
253755_at
X axis is samples (pdf file), and Y axis is log2-expression.
|
AtGenExpress*
(Hormone) |
253755_at
X axis is samples (xls file), and Y axis is log-expression.
|
AT4G29040 Gene
