[←][→] ath   AT4G29890 Gene
functional annotation
Function   choline monooxygenase, putative (CMO-like)  
GO BP
GO:0019285 [list] [network] glycine betaine biosynthetic process from choline  (2 genes)  IEA  
GO:0055114 [list] [network] oxidation-reduction process  (1468 genes)  IEA  
GO CC
GO:0009570 [list] [network] chloroplast stroma  (750 genes)  IEA  
GO:0009507 [list] [network] chloroplast  (5095 genes)  ISM  
GO MF
GO:0019133 [list] [network] choline monooxygenase activity  (1 genes)  IEA  
GO:0051537 [list] [network] 2 iron, 2 sulfur cluster binding  (57 genes)  IEA  
GO:0005506 [list] [network] iron ion binding  (281 genes)  IEA  
KEGG ath00260 [list] [network] Glycine, serine and threonine metabolism (70 genes)
Protein NP_194718.2 
BLAST NP_194718.2 
Orthologous [Ortholog page] LOC778432 (zma)  LOC7485492 (ppo)  LOC9272377 (osa)  LOC11421939 (mtr)  LOC100256530 (vvi)  LOC100785909 (gma)  LOC101249833 (sly)  LOC101261534 (sly)  LOC103861915 (bra) 
Subcellular
localization
wolf
chlo 6,  nucl 2,  cyto 1,  cysk 1  (predict for NP_194718.2)
Subcellular
localization
TargetP
chlo 8  (predict for NP_194718.2)
Gene coexpression
Network*for
coexpressed
genes
LCNloc
[Cytoscape]
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ath00510 N-Glycan biosynthesis 2
ath00513 Various types of N-glycan biosynthesis 2
ath03040 Spliceosome 2
Genes directly connected with AT4G29890 on the network
coex z* Locus Function* Coexpression
detail		 Entrez Gene ID*
6.4 AT3G02300 Regulator of chromosome condensation (RCC1) family protein [detail] 821167
5.8 AT1G02960 kinetochore protein [detail] 839363
5.7 AT2G25590 Plant Tudor-like protein [detail] 817098
5.6 AT5G53850 haloacid dehalogenase-like hydrolase family protein [detail] 835466
5.4 AT5G14500 aldose 1-epimerase family protein [detail] 831301
4.9 AT5G41960 zinc finger matrin-type protein [detail] 834201
4.8 MBD7 methyl-CPG-binding domain 7 [detail] 836101
Coexpressed
gene list		 [Coexpressed gene list for AT4G29890]
Gene expression
All samples [Expression pattern for all samples]
AtGenExpress*
(Development)
253701_at
253701_at.png

X axis is samples (pdf file), and Y axis is log2-expression.
"1st Q", "mean" and "3rd Q" indecate the values for all genes on a GeneChip. Q: quartile.

AtGenExpress*
(Stress)
253701_at
253701_at.png

X axis is samples (pdf file), and Y axis is log2-expression.
AtGenExpress*
(Hormone)
253701_at
253701_at.png

X axis is samples (xls file), and Y axis is log-expression.
Link to other DBs
Entrez Gene ID 829111      
Refseq ID (protein) NP_194718.2 


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