[←][→] ath   At4g30160 Gene
functional annotation
Function   villin 4    Plant GARDEN Plant GARDEN JBrowse
GO BP
GO:0051764 [list] [network] actin crosslink formation  (1 genes)  IDA  
GO:0099636 [list] [network] cytoplasmic streaming  (2 genes)  IMP  
GO:0051014 [list] [network] actin filament severing  (3 genes)  IDA  
GO:0030042 [list] [network] actin filament depolymerization  (12 genes)  IDA  
GO:0007015 [list] [network] actin filament organization  (70 genes)  IMP  
GO:0048767 [list] [network] root hair elongation  (78 genes)  IMP  
GO CC
GO:0005884 [list] [network] actin filament  (11 genes)  IDA  
GO:0005886 [list] [network] plasma membrane  (2529 genes)  HDA  
GO:0005829 [list] [network] cytosol  (2559 genes)  IMP  
GO:0005634 [list] [network] nucleus  (10305 genes)  ISM  
GO:0005622 [list] [network] intracellular anatomical structure  (21148 genes)  IMP  
GO MF
GO:0051015 [list] [network] actin filament binding  (39 genes)  IDA  
GO:0003729 [list] [network] mRNA binding  (1535 genes)  IDA  
KEGG
Protein NP_001190869.1  NP_001329917.1  NP_001329918.1  NP_194745.1 
BLAST NP_001190869.1  NP_001329917.1  NP_001329918.1  NP_194745.1 
Orthologous [Ortholog page] VLN5 (ath)  LOC4336902 (osa)  LOC4341731 (osa)  LOC4345036 (osa)  LOC7488953 (ppo)  LOC11431044 (mtr)  LOC11440584 (mtr)  LOC18100472 (ppo)  LOC100798962 (gma)  LOC100807762 (gma)  LOC100808499 (gma)  LOC100809968 (gma)  LOC101259383 (sly)  LOC103834688 (bra)  LOC103845171 (bra)  LOC103852892 (bra)  LOC103856760 (bra)  LOC103861931 (bra)  LOC123046533 (tae)  LOC123054391 (tae)  LOC123072793 (tae)  LOC123080954 (tae)  LOC123154779 (tae)  LOC123190268 (tae)  LOC123410231 (hvu)  LOC123427704 (hvu)  LOC123445657 (hvu) 
Subcellular
localization
wolf
nucl 6,  cyto 4  (predict for NP_001190869.1)
nucl 6,  cyto 4  (predict for NP_001329917.1)
nucl 6,  cyto 4  (predict for NP_001329918.1)
nucl 6,  cyto 4  (predict for NP_194745.1)
Subcellular
localization
TargetP
other 8  (predict for NP_001190869.1)
other 8  (predict for NP_001329917.1)
other 8  (predict for NP_001329918.1)
other 8  (predict for NP_194745.1)
Gene coexpression
Network*for
coexpressed
genes
LCNloc
[Cytoscape]
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ath04141 Protein processing in endoplasmic reticulum 5
ath04144 Endocytosis 2
Genes directly connected with VLN4 on the network
coex z* Locus Function* Coexpression
detail		 Entrez Gene ID*
8.1 AT1G52360 Coatomer, beta' subunit [detail] 841666
7.0 AT2G01690 ARM repeat superfamily protein [detail] 814698
6.8 AT4G32640 Sec23/Sec24 protein transport family protein [detail] 829399
5.8 AT3G05050 Protein kinase superfamily protein [detail] 819667
Coexpressed
gene list		 [Coexpressed gene list for VLN4]
Gene expression
All samples [Expression pattern for all samples]
AtGenExpress*
(Development)
253663_at
253663_at.png

X axis is samples (pdf file), and Y axis is log2-expression.
"1st Q", "mean" and "3rd Q" indecate the values for all genes on a GeneChip. Q: quartile.

AtGenExpress*
(Stress)
253663_at
253663_at.png

X axis is samples (pdf file), and Y axis is log2-expression.
AtGenExpress*
(Hormone)
253663_at
253663_at.png

X axis is samples (xls file), and Y axis is log-expression.
Link to other DBs
Entrez Gene ID 829139      
Refseq ID (protein) NP_001190869.1 
NP_001329917.1 
NP_001329918.1 
NP_194745.1 


The preparation time of this page was 0.5 [sec].