ATTED-II : GeneID search result

[←][→] ath At4g30820 Gene

functional annotation

Function

cyclin-dependent kinase-activating kinase assembly factor-related / CDK-activating kinase assembly factor-like protein

GO BP

GO CC

GO:0009507 [list] [network] chloroplast	(5004 genes)	ISM
GO:0005634 [list] [network] nucleus	(10305 genes)	ISM

GO MF

GO:0005515 [list] [network] protein binding

(5066 genes)

IPI

KEGG

ath03022 [list] [network] Basal transcription factors (55 genes)

ath03420 [list] [network] Nucleotide excision repair (62 genes)

Protein

NP_001078472.1 NP_001328131.1 NP_001328132.1 NP_001328133.1 NP_001328134.1 NP_001328135.1 NP_001328136.1 NP_001328137.1 NP_001328138.1 NP_001328139.1 NP_001328140.1 NP_001328141.1 NP_001328142.1 NP_001328143.1 NP_001328144.1 NP_001328145.1 NP_001328146.1 NP_001328147.1 NP_001328148.1 NP_001328149.1 NP_001328150.1 NP_001328151.1 NP_001328152.1 NP_001328153.1 NP_001328154.1 NP_567855.1 NP_849476.1

BLAST

Orthologous

[Ortholog page] LOC4340268 (osa) LOC4350497 (osa) LOC7485263 (ppo) LOC7489425 (ppo) LOC11434892 (mtr) LOC100305654 (gma) LOC101265536 (sly) LOC103834652 (bra) LOC103862006 (bra) LOC123152550 (tae) LOC123160923 (tae) LOC123167001 (tae) LOC123410832 (hvu)

Subcellular
localization
wolf

cyto_nucl 3, nucl 3, cyto 3, mito 3, cysk_nucl 1, nucl_plas 1	(predict for NP_001078472.1)
cyto_nucl 3, nucl 3, cyto 3, mito 3, cysk_nucl 1, nucl_plas 1	(predict for NP_001328131.1)
chlo 4, chlo_mito 4, mito 2, nucl 1, cyto 1, cyto_nucl 1	(predict for NP_001328132.1)
mito 4, cyto 4, nucl 1, cysk_nucl 1	(predict for NP_001328133.1)
mito 4, cyto 4, nucl 1, cysk_nucl 1	(predict for NP_001328134.1)
chlo 4, chlo_mito 4, mito 2, nucl 1, cyto 1, cyto_nucl 1	(predict for NP_001328135.1)
chlo 4, chlo_mito 4, mito 2, nucl 1, cyto 1, cyto_nucl 1	(predict for NP_001328136.1)
chlo 9	(predict for NP_001328137.1)
chlo 9	(predict for NP_001328138.1)
chlo 9	(predict for NP_001328139.1)
chlo 4, chlo_mito 4, mito 2, nucl 1, cyto 1, cyto_nucl 1	(predict for NP_001328140.1)
mito 7, cyto 1, chlo 1, nucl 1, cyto_pero 1, cyto_E.R. 1, cyto_plas 1	(predict for NP_001328141.1)
mito 4, cyto 4, nucl 1, cysk_nucl 1	(predict for NP_001328142.1)
cyto_nucl 3, nucl 3, cyto 3, mito 3, cysk_nucl 1, nucl_plas 1	(predict for NP_001328143.1)
chlo 9	(predict for NP_001328144.1)
chlo 4, chlo_mito 4, mito 2, nucl 1, cyto 1, cyto_nucl 1	(predict for NP_001328145.1)
mito 4, cyto 4, nucl 1, cysk_nucl 1	(predict for NP_001328146.1)
cyto_nucl 3, nucl 3, cyto 3, mito 3, cysk_nucl 1, nucl_plas 1	(predict for NP_001328147.1)
mito 4, cyto 4, nucl 1, cysk_nucl 1	(predict for NP_001328148.1)
chlo 4, chlo_mito 4, mito 2, nucl 1, cyto 1, cyto_nucl 1	(predict for NP_001328149.1)
mito 4, cyto 4, nucl 1, cysk_nucl 1	(predict for NP_001328150.1)
mito 4, cyto 4, nucl 1, cysk_nucl 1	(predict for NP_001328151.1)
mito 4, cyto 4, nucl 1, cysk_nucl 1	(predict for NP_001328152.1)
mito 7, cyto 1, chlo 1, nucl 1, cyto_pero 1, cyto_E.R. 1, cyto_plas 1	(predict for NP_001328153.1)
cyto_nucl 3, nucl 3, cyto 3, mito 3, cysk_nucl 1, nucl_plas 1	(predict for NP_001328154.1)
cyto_nucl 3, nucl 3, cyto 3, mito 3, cysk_nucl 1, nucl_plas 1	(predict for NP_567855.1)
cyto_nucl 3, nucl 3, cyto 3, mito 3, cysk_nucl 1, nucl_plas 1	(predict for NP_849476.1)

Subcellular
localization
TargetP

other 5, mito 3	(predict for NP_001078472.1)
other 5, mito 3	(predict for NP_001328131.1)
mito 7, other 7	(predict for NP_001328132.1)
other 8	(predict for NP_001328133.1)
other 8	(predict for NP_001328134.1)
mito 7, other 7	(predict for NP_001328135.1)
mito 7, other 7	(predict for NP_001328136.1)
mito 6	(predict for NP_001328137.1)
mito 6	(predict for NP_001328138.1)
mito 6	(predict for NP_001328139.1)
mito 7, other 7	(predict for NP_001328140.1)
other 8, mito 5	(predict for NP_001328141.1)
other 8	(predict for NP_001328142.1)
other 5, mito 3	(predict for NP_001328143.1)
mito 6	(predict for NP_001328144.1)
mito 7, other 7	(predict for NP_001328145.1)
other 8	(predict for NP_001328146.1)
other 5, mito 3	(predict for NP_001328147.1)
other 8	(predict for NP_001328148.1)
mito 7, other 7	(predict for NP_001328149.1)
other 8	(predict for NP_001328150.1)
other 8	(predict for NP_001328151.1)
other 8	(predict for NP_001328152.1)
other 8, mito 5	(predict for NP_001328153.1)
other 5, mito 3	(predict for NP_001328154.1)
other 5, mito 3	(predict for NP_567855.1)
other 5, mito 3	(predict for NP_849476.1)

Gene coexpression

Network^*for
coexpressed
genes

[Cytoscape]

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
ath03040	Spliceosome	5

Genes directly connected with AT4G30820 on the network
coex z^*	Locus	Function^*	CoexViewer	Entrez Gene ID^*
7.3	ING1	RING/FYVE/PHD zinc finger superfamily protein	[detail]	821986
7.1	TAF15	TBP-associated factor 15	[detail]	841452
6.4	AT5G17440	LUC7 related protein	[detail]	831610
5.1	AT3G59390	glycosyltransferase family protein	[detail]	825108

Coexpressed
gene list

[Coexpressed gene list for AT4G30820]

Gene expression

All samples

[Expression pattern for all samples]

AtGenExpress^*
(Development)

253594_at

X axis is samples (pdf file), and Y axis is log2-expression.
"1st Q", "mean" and "3rd Q" indecate the values for all genes on a GeneChip. Q: quartile.

AtGenExpress^*
(Stress)

253594_at

X axis is samples (pdf file), and Y axis is log2-expression.

AtGenExpress^*
(Hormone)

253594_at

X axis is samples (xls file), and Y axis is log-expression.

Link to other DBs
Entrez Gene ID	829205
Refseq ID (protein)	NP_001078472.1
	NP_001328131.1
	NP_001328132.1
	NP_001328133.1
	NP_001328134.1
	NP_001328135.1
	NP_001328136.1
	NP_001328137.1
	NP_001328138.1
	NP_001328139.1
	NP_001328140.1
	NP_001328141.1
	NP_001328142.1
	NP_001328143.1
	NP_001328144.1
	NP_001328145.1
	NP_001328146.1
	NP_001328147.1
	NP_001328148.1
	NP_001328149.1
	NP_001328150.1
	NP_001328151.1
	NP_001328152.1
	NP_001328153.1
	NP_001328154.1
	NP_567855.1
	NP_849476.1

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