[←][→] ath   AT4G30820 Gene
functional annotation
Function   cyclin-dependent kinase-activating kinase assembly factor-related / CDK-activating kinase assembly factor-like protein  
GO BP
GO:0045737 [list] [network] positive regulation of cyclin-dependent protein serine/threonine kinase activity  (1 genes)  IEA  
GO:0006289 [list] [network] nucleotide-excision repair  (46 genes)  IEA  
GO:0016310 [list] [network] phosphorylation  (1279 genes)  IEA  
GO CC
GO:0005675 [list] [network] transcription factor TFIIH holo complex  (15 genes)  IEA  
GO:0009507 [list] [network] chloroplast  (5095 genes)  ISM  
GO:0005634 [list] [network] nucleus  (10793 genes)  ISM  
GO MF
GO:0061575 [list] [network] cyclin-dependent protein serine/threonine kinase activator activity  (7 genes)  IEA  
GO:0016301 [list] [network] kinase activity  (1362 genes)  IEA  
GO:0005515 [list] [network] protein binding  (4605 genes)  IPI  
KEGG ath03022 [list] [network] Basal transcription factors (55 genes)
ath03420 [list] [network] Nucleotide excision repair (69 genes)
Protein NP_001078472.1  NP_001328131.1  NP_001328132.1  NP_001328133.1  NP_001328134.1  NP_001328135.1  NP_001328136.1  NP_001328137.1  NP_001328138.1  NP_001328139.1  NP_001328140.1  NP_001328141.1  NP_001328142.1  NP_001328143.1  NP_001328144.1  NP_001328145.1  NP_001328146.1  NP_001328147.1  NP_001328148.1  NP_001328149.1  NP_001328150.1  NP_001328151.1  NP_001328152.1  NP_001328153.1  NP_001328154.1  NP_567855.1  NP_849476.1 
BLAST NP_001078472.1  NP_001328131.1  NP_001328132.1  NP_001328133.1  NP_001328134.1  NP_001328135.1  NP_001328136.1  NP_001328137.1  NP_001328138.1  NP_001328139.1  NP_001328140.1  NP_001328141.1  NP_001328142.1  NP_001328143.1  NP_001328144.1  NP_001328145.1  NP_001328146.1  NP_001328147.1  NP_001328148.1  NP_001328149.1  NP_001328150.1  NP_001328151.1  NP_001328152.1  NP_001328153.1  NP_001328154.1  NP_567855.1  NP_849476.1 
Orthologous [Ortholog page] LOC4340268 (osa)  LOC4350497 (osa)  LOC7485263 (ppo)  LOC7489425 (ppo)  LOC11434892 (mtr)  LOC100246771 (vvi)  LOC100284506 (zma)  LOC100305654 (gma)  LOC101265536 (sly)  LOC103638012 (zma)  LOC103834652 (bra)  LOC103862006 (bra) 
Subcellular
localization
wolf
cyto_nucl 3,  nucl 3,  cyto 3,  mito 3,  cysk_nucl 1,  nucl_plas 1  (predict for NP_001078472.1)
cyto_nucl 3,  nucl 3,  cyto 3,  mito 3,  cysk_nucl 1,  nucl_plas 1  (predict for NP_001328131.1)
chlo 4,  chlo_mito 4,  mito 2,  nucl 1,  cyto 1,  cyto_nucl 1  (predict for NP_001328132.1)
mito 4,  cyto 4,  nucl 1,  cysk_nucl 1  (predict for NP_001328133.1)
mito 4,  cyto 4,  nucl 1,  cysk_nucl 1  (predict for NP_001328134.1)
chlo 4,  chlo_mito 4,  mito 2,  nucl 1,  cyto 1,  cyto_nucl 1  (predict for NP_001328135.1)
chlo 4,  chlo_mito 4,  mito 2,  nucl 1,  cyto 1,  cyto_nucl 1  (predict for NP_001328136.1)
chlo 9  (predict for NP_001328137.1)
chlo 9  (predict for NP_001328138.1)
chlo 9  (predict for NP_001328139.1)
chlo 4,  chlo_mito 4,  mito 2,  nucl 1,  cyto 1,  cyto_nucl 1  (predict for NP_001328140.1)
mito 7,  cyto 1,  chlo 1,  nucl 1,  cyto_pero 1,  cyto_E.R. 1,  cyto_plas 1  (predict for NP_001328141.1)
mito 4,  cyto 4,  nucl 1,  cysk_nucl 1  (predict for NP_001328142.1)
cyto_nucl 3,  nucl 3,  cyto 3,  mito 3,  cysk_nucl 1,  nucl_plas 1  (predict for NP_001328143.1)
chlo 9  (predict for NP_001328144.1)
chlo 4,  chlo_mito 4,  mito 2,  nucl 1,  cyto 1,  cyto_nucl 1  (predict for NP_001328145.1)
mito 4,  cyto 4,  nucl 1,  cysk_nucl 1  (predict for NP_001328146.1)
cyto_nucl 3,  nucl 3,  cyto 3,  mito 3,  cysk_nucl 1,  nucl_plas 1  (predict for NP_001328147.1)
mito 4,  cyto 4,  nucl 1,  cysk_nucl 1  (predict for NP_001328148.1)
chlo 4,  chlo_mito 4,  mito 2,  nucl 1,  cyto 1,  cyto_nucl 1  (predict for NP_001328149.1)
mito 4,  cyto 4,  nucl 1,  cysk_nucl 1  (predict for NP_001328150.1)
mito 4,  cyto 4,  nucl 1,  cysk_nucl 1  (predict for NP_001328151.1)
mito 4,  cyto 4,  nucl 1,  cysk_nucl 1  (predict for NP_001328152.1)
mito 7,  cyto 1,  chlo 1,  nucl 1,  cyto_pero 1,  cyto_E.R. 1,  cyto_plas 1  (predict for NP_001328153.1)
cyto_nucl 3,  nucl 3,  cyto 3,  mito 3,  cysk_nucl 1,  nucl_plas 1  (predict for NP_001328154.1)
cyto_nucl 3,  nucl 3,  cyto 3,  mito 3,  cysk_nucl 1,  nucl_plas 1  (predict for NP_567855.1)
cyto_nucl 3,  nucl 3,  cyto 3,  mito 3,  cysk_nucl 1,  nucl_plas 1  (predict for NP_849476.1)
Subcellular
localization
TargetP
other 5,  mito 3  (predict for NP_001078472.1)
other 5,  mito 3  (predict for NP_001328131.1)
mito 7,  other 7  (predict for NP_001328132.1)
other 8  (predict for NP_001328133.1)
other 8  (predict for NP_001328134.1)
mito 7,  other 7  (predict for NP_001328135.1)
mito 7,  other 7  (predict for NP_001328136.1)
mito 6  (predict for NP_001328137.1)
mito 6  (predict for NP_001328138.1)
mito 6  (predict for NP_001328139.1)
mito 7,  other 7  (predict for NP_001328140.1)
other 8,  mito 5  (predict for NP_001328141.1)
other 8  (predict for NP_001328142.1)
other 5,  mito 3  (predict for NP_001328143.1)
mito 6  (predict for NP_001328144.1)
mito 7,  other 7  (predict for NP_001328145.1)
other 8  (predict for NP_001328146.1)
other 5,  mito 3  (predict for NP_001328147.1)
other 8  (predict for NP_001328148.1)
mito 7,  other 7  (predict for NP_001328149.1)
other 8  (predict for NP_001328150.1)
other 8  (predict for NP_001328151.1)
other 8  (predict for NP_001328152.1)
other 8,  mito 5  (predict for NP_001328153.1)
other 5,  mito 3  (predict for NP_001328154.1)
other 5,  mito 3  (predict for NP_567855.1)
other 5,  mito 3  (predict for NP_849476.1)
Gene coexpression
Network*for
coexpressed
genes
LCNloc
[Cytoscape]
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ath03040 Spliceosome 4
Genes directly connected with AT4G30820 on the network
coex z* Locus Function* Coexpression
detail		 Entrez Gene ID*
7.6 ING1 RING/FYVE/PHD zinc finger superfamily protein [detail] 821986
7.0 AT5G26610 D111/G-patch domain-containing protein [detail] 832729
6.6 AT5G22040 ubiquitin carboxyl-terminal hydrolase [detail] 832265
6.1 AT4G35785 RNA-binding (RRM/RBD/RNP motifs) family protein [detail] 829732
5.9 AT4G23330 hypothetical protein [detail] 828432
5.7 AT3G58090 Disease resistance-responsive (dirigent-like protein) family protein [detail] 3769734
5.4 AT5G42770 Maf-like protein [detail] 834287
5.2 AT5G52545 RNA-binding protein-like RNA recognition motif protein [detail] 835331
Coexpressed
gene list		 [Coexpressed gene list for AT4G30820]
Gene expression
All samples [Expression pattern for all samples]
AtGenExpress*
(Development)
253594_at
253594_at.png

X axis is samples (pdf file), and Y axis is log2-expression.
"1st Q", "mean" and "3rd Q" indecate the values for all genes on a GeneChip. Q: quartile.

AtGenExpress*
(Stress)
253594_at
253594_at.png

X axis is samples (pdf file), and Y axis is log2-expression.
AtGenExpress*
(Hormone)
253594_at
253594_at.png

X axis is samples (xls file), and Y axis is log-expression.
Link to other DBs
Entrez Gene ID 829205      
Refseq ID (protein) NP_001078472.1 
NP_001328131.1 
NP_001328132.1 
NP_001328133.1 
NP_001328134.1 
NP_001328135.1 
NP_001328136.1 
NP_001328137.1 
NP_001328138.1 
NP_001328139.1 
NP_001328140.1 
NP_001328141.1 
NP_001328142.1 
NP_001328143.1 
NP_001328144.1 
NP_001328145.1 
NP_001328146.1 
NP_001328147.1 
NP_001328148.1 
NP_001328149.1 
NP_001328150.1 
NP_001328151.1 
NP_001328152.1 
NP_001328153.1 
NP_001328154.1 
NP_567855.1 
NP_849476.1 


The preparation time of this page was 0.3 [sec].