functional annotation |
Function |
fatty acid desaturase 6 |
|
GO BP |
GO:0010205 [list] [network] photoinhibition
|
(13 genes)
|
IMP
|
|
GO:0006636 [list] [network] unsaturated fatty acid biosynthetic process
|
(23 genes)
|
IEA
|
|
GO:0006633 [list] [network] fatty acid biosynthetic process
|
(150 genes)
|
TAS
|
|
GO:0055114 [list] [network] oxidation-reduction process
|
(1468 genes)
|
IEA
|
|
|
GO CC |
GO:0009706 [list] [network] chloroplast inner membrane
|
(80 genes)
|
IEA
|
|
GO:0009941 [list] [network] chloroplast envelope
|
(666 genes)
|
IDA
|
|
GO:0005886 [list] [network] plasma membrane
|
(3771 genes)
|
HDA
|
|
GO:0016021 [list] [network] integral component of membrane
|
(4803 genes)
|
IEA
|
|
GO:0009507 [list] [network] chloroplast
|
(5095 genes)
|
IDA
ISM
NAS
|
|
|
GO MF |
GO:0045485 [list] [network] omega-6 fatty acid desaturase activity
|
(2 genes)
|
IGI
|
|
GO:0016491 [list] [network] oxidoreductase activity
|
(1435 genes)
|
IEA
|
|
|
KEGG |
|
|
Protein |
NP_194824.1
|
BLAST |
NP_194824.1
|
Orthologous |
[Ortholog page]
FAD6.1 (gma)
LOC4345686 (osa)
LOC7485241 (ppo)
LOC11441075 (mtr)
LOC25488375 (mtr)
LOC100101547 (zma)
LOC100248377 (vvi)
LOC101265653 (sly)
LOC103834644 (bra)
LOC103852217 (bra)
|
Subcellular localization wolf |
chlo 6,
E.R. 1,
nucl 1,
mito 1,
vacu 1,
golg 1,
E.R._plas 1,
cyto_E.R. 1
|
(predict for NP_194824.1)
|
|
Subcellular localization TargetP |
chlo 8
|
(predict for NP_194824.1)
|
|
Gene coexpression |
Network*for coexpressed genes |
KEGG* ID |
Title |
#genes |
Link to the KEGG* map (Multiple genes) |
ath00010 |
Glycolysis / Gluconeogenesis |
2 |
|
ath00710 |
Carbon fixation in photosynthetic organisms |
2 |
|
ath01200 |
Carbon metabolism |
2 |
|
ath01230 |
Biosynthesis of amino acids |
2 |
|
Genes directly connected with FAD6 on the network
coex z* |
Locus |
Function* |
Coexpression detail |
Entrez Gene ID* |
9.2 |
APG1 |
S-adenosyl-L-methionine-dependent methyltransferases superfamily protein |
[detail] |
825516 |
8.4 |
EDA3 |
DnaJ/Hsp40 cysteine-rich domain superfamily protein |
[detail] |
818051 |
8.0 |
HCF101 |
ATP binding protein |
[detail] |
822033 |
6.8 |
AT3G50790 |
esterase/lipase/thioesterase family protein |
[detail] |
824243 |
6.6 |
FAD7 |
fatty acid desaturase 7 |
[detail] |
820288 |
|
Coexpressed gene list |
[Coexpressed gene list for FAD6]
|
Gene expression |
All samples |
[Expression pattern for all samples]
|
AtGenExpress* (Development) |
253547_at
X axis is samples (pdf file), and Y axis is log2-expression.
"1st Q", "mean" and "3rd Q" indecate the values for all genes on a GeneChip. Q: quartile.
|
AtGenExpress* (Stress) |
253547_at
X axis is samples (pdf file), and Y axis is log2-expression.
|
AtGenExpress* (Hormone) |
253547_at
X axis is samples (xls file), and Y axis is log-expression.
|