[←][→] ath   AT4G34200 Gene
functional annotation
Function   D-3-phosphoglycerate dehydrogenase  
GO BP
GO:0006564 [list] [network] L-serine biosynthetic process  (7 genes)  IEA  
GO:0000096 [list] [network] sulfur amino acid metabolic process  (59 genes)  IMP  
GO:0009561 [list] [network] megagametogenesis  (72 genes)  IMP  
GO:0009555 [list] [network] pollen development  (337 genes)  IMP  
GO:0006520 [list] [network] cellular amino acid metabolic process  (369 genes)  IBA  
GO:0009793 [list] [network] embryo development ending in seed dormancy  (547 genes)  IMP  
GO:0055114 [list] [network] oxidation-reduction process  (1468 genes)  IEA  
GO CC
GO:0009570 [list] [network] chloroplast stroma  (750 genes)  IBA IDA  
GO:0005829 [list] [network] cytosol  (3506 genes)  RCA  
GO:0005886 [list] [network] plasma membrane  (3771 genes)  HDA  
GO:0005739 [list] [network] mitochondrion  (4405 genes)  IDA  
GO:0009507 [list] [network] chloroplast  (5095 genes)  IDA ISM  
GO:0009536 [list] [network] plastid  (5519 genes)  IDA  
GO MF
GO:0004617 [list] [network] phosphoglycerate dehydrogenase activity  (6 genes)  IBA IMP  
GO:0051287 [list] [network] NAD binding  (66 genes)  IEA  
GO:0005524 [list] [network] ATP binding  (2003 genes)  IDA  
KEGG ath00260 [list] [network] Glycine, serine and threonine metabolism (70 genes)
ath00270 [list] [network] Cysteine and methionine metabolism (121 genes)
ath01200 [list] [network] Carbon metabolism (273 genes)
ath01230 [list] [network] Biosynthesis of amino acids (251 genes)
Protein NP_195146.1 
BLAST NP_195146.1 
Orthologous [Ortholog page] AT3G19480 (ath)  PGDH (ath)  LOC4337230 (osa)  LOC4341713 (osa)  LOC4345710 (osa)  LOC7490861 (ppo)  LOC7491573 (ppo)  LOC7492063 (ppo)  LOC11434383 (mtr)  LOC25485421 (mtr)  LOC100241666 (vvi)  LOC100259056 (vvi)  LOC100260655 (vvi)  LOC100280688 (zma)  LOC100280735 (zma)  LOC100281928 (zma)  LOC100793819 (gma)  LOC100808771 (gma)  LOC100817949 (gma)  LOC100819264 (gma)  LOC101246616 (sly)  LOC101254848 (sly)  LOC101266918 (sly)  LOC103645840 (zma)  LOC103834426 (bra)  LOC103835943 (bra)  LOC103840754 (bra)  LOC103859810 (bra)  LOC103862328 (bra) 
Subcellular
localization
wolf
chlo 10  (predict for NP_195146.1)
Subcellular
localization
TargetP
chlo 9  (predict for NP_195146.1)
Gene coexpression
Network*for
coexpressed
genes
LCNloc
[Cytoscape]
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ath01200 Carbon metabolism 7
ath01230 Biosynthesis of amino acids 7
ath00260 Glycine, serine and threonine metabolism 4
ath00270 Cysteine and methionine metabolism 3
ath00190 Oxidative phosphorylation 3
Genes directly connected with EDA9 on the network
coex z* Locus Function* Coexpression
detail		 Entrez Gene ID*
8.0 PSAT phosphoserine aminotransferase [detail] 829715
7.9 LAP1 Cytosol aminopeptidase family protein [detail] 816954
7.5 AT5G08690 ATP synthase alpha/beta family protein [detail] 830770
5.6 GAPCP-2 glyceraldehyde-3-phosphate dehydrogenase of plastid 2 [detail] 838199
Coexpressed
gene list		 [Coexpressed gene list for EDA9]
Gene expression
All samples [Expression pattern for all samples]
AtGenExpress*
(Development)
253274_at
253274_at.png

X axis is samples (pdf file), and Y axis is log2-expression.
"1st Q", "mean" and "3rd Q" indecate the values for all genes on a GeneChip. Q: quartile.

AtGenExpress*
(Stress)
253274_at
253274_at.png

X axis is samples (pdf file), and Y axis is log2-expression.
AtGenExpress*
(Hormone)
253274_at
253274_at.png

X axis is samples (xls file), and Y axis is log-expression.
Link to other DBs
Entrez Gene ID 829568      
Refseq ID (protein) NP_195146.1 


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