ATTED-II : GeneID search result

[←][→] ath At4g35920 Gene

functional annotation

Function

PLAC8 family protein

GO BP

GO:0071260 [list] [network] cellular response to mechanical stimulus	(3 genes)	IMP
GO:0007231 [list] [network] osmosensory signaling pathway	(5 genes)	IMP
GO:0007166 [list] [network] cell surface receptor signaling pathway	(19 genes)	IEA
GO:0070588 [list] [network] calcium ion transmembrane transport	(22 genes)	IDA
GO:0033500 [list] [network] carbohydrate homeostasis	(27 genes)	IMP
GO:0006816 [list] [network] calcium ion transport	(55 genes)	IGI IMP

GO CC

GO:0005634 [list] [network] nucleus

(10305 genes)

ISM

GO MF

GO:0005262 [list] [network] calcium channel activity

(33 genes)

IDA

KEGG

Protein

NP_001329715.1 NP_001329716.1 NP_195317.2 NP_849503.1 NP_849504.2

BLAST

NP_001329715.1 NP_001329716.1 NP_195317.2 NP_849503.1 NP_849504.2

Orthologous

[Ortholog page] MCA2 (ath) LOC4331673 (osa) LOC11421841 (mtr) LOC11445352 (mtr) LOC18099153 (ppo) LOC100809825 (gma) LOC100811369 (gma) LOC100820146 (gma) LOC101266587 (sly) LOC103837827 (bra) LOC103862445 (bra) LOC103872098 (bra) LOC123084888 (tae) LOC123093199 (tae) LOC123098462 (tae) LOC123449481 (hvu)

Subcellular
localization
wolf

nucl 3, E.R._plas 2, plas 1, E.R. 1, cyto_nucl 1, golg 1, cysk_nucl 1	(predict for NP_001329715.1)
nucl 3, E.R._plas 2, plas 1, E.R. 1, cyto_nucl 1, golg 1, cysk_nucl 1	(predict for NP_001329716.1)
nucl 3, E.R._plas 2, plas 1, E.R. 1, cyto_nucl 1, golg 1, cysk_nucl 1	(predict for NP_195317.2)
nucl 3, E.R._plas 2, plas 1, E.R. 1, cyto_nucl 1, golg 1, cysk_nucl 1	(predict for NP_849503.1)
nucl 3, E.R._plas 2, plas 1, E.R. 1, cyto_nucl 1, golg 1, cysk_nucl 1	(predict for NP_849504.2)

Subcellular
localization
TargetP

other 8, scret 3	(predict for NP_001329715.1)
other 8, scret 3	(predict for NP_001329716.1)
other 8, scret 3	(predict for NP_195317.2)
other 8, scret 3	(predict for NP_849503.1)
other 8, scret 3	(predict for NP_849504.2)

Gene coexpression

Network^*for
coexpressed
genes

[Cytoscape]

Genes directly connected with MCA1 on the network
coex z^*	Locus	Function^*	CoexViewer	Entrez Gene ID^*
5.3	AT3G56370	Leucine-rich repeat protein kinase family protein	[detail]	824804
5.2	PERK14	Protein kinase superfamily protein	[detail]	3770575
5.1	AT1G69420	DHHC-type zinc finger family protein	[detail]	843274

Coexpressed
gene list

[Coexpressed gene list for MCA1]

Gene expression

All samples

[Expression pattern for all samples]

AtGenExpress^*
(Development)

253109_at

X axis is samples (pdf file), and Y axis is log2-expression.
"1st Q", "mean" and "3rd Q" indecate the values for all genes on a GeneChip. Q: quartile.

AtGenExpress^*
(Stress)

253109_at

X axis is samples (pdf file), and Y axis is log2-expression.

AtGenExpress^*
(Hormone)

253109_at

X axis is samples (xls file), and Y axis is log-expression.

Link to other DBs
Entrez Gene ID	829747
Refseq ID (protein)	NP_001329715.1
	NP_001329716.1
	NP_195317.2
	NP_849503.1
	NP_849504.2

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