[←][→] ath   At4g37120 Gene
functional annotation
Function   Pre-mRNA splicing Prp18-interacting factor      
GO BP
GO:0010230 [list] [network] alternative respiration  (7 genes)  IMP  
GO:0010100 [list] [network] negative regulation of photomorphogenesis  (16 genes)  IGI  
GO:0008284 [list] [network] positive regulation of cell population proliferation  (27 genes)  IGI  
GO:0008380 [list] [network] RNA splicing  (191 genes)  TAS  
GO CC
GO:0005634 [list] [network] nucleus  (10305 genes)  ISM  
GO MF
GO:0030628 [list] [network] pre-mRNA 3'-splice site binding  (2 genes)  IEA  
GO:0003727 [list] [network] single-stranded RNA binding  (55 genes)  TAS  
GO:0005515 [list] [network] protein binding  (5066 genes)  IPI  
KEGG ath03040 [list] [network] Spliceosome (203 genes)
Protein NP_568017.1 
BLAST NP_568017.1 
Orthologous [Ortholog page] SMP1 (ath)  LOC4344572 (osa)  LOC7453862 (ppo)  LOC7484720 (ppo)  LOC25499261 (mtr)  LOC100778457 (gma)  LOC100797503 (gma)  LOC101252328 (sly)  LOC101260949 (sly)  LOC103833762 (bra)  LOC103836599 (bra)  LOC103844304 (bra)  LOC123147479 (tae)  LOC123159366 (tae)  LOC123169807 (tae)  LOC123407575 (hvu) 
Subcellular
localization
wolf
nucl 4,  cyto 3,  mito 2,  nucl_plas 2  (predict for NP_568017.1)
Subcellular
localization
TargetP
other 8  (predict for NP_568017.1)
Gene coexpression
Network*for
coexpressed
genes
LCNloc
[Cytoscape]
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ath03040 Spliceosome 3
Genes directly connected with SMP2 on the network
coex z* Locus Function* CoexViewer Entrez Gene ID*
9.5 AT2G44200 pre-mRNA splicing factor domain-containing protein [detail] 819028
8.3 AT2G27285 nuclear speckle splicing regulatory-like protein (DUF2040) [detail] 817271
8.2 AT2G16860 GCIP-interacting family protein [detail] 816187
7.9 AT1G16210 coiled-coil protein [detail] 838189
7.4 emb1441 zinc knuckle (CCHC-type) family protein [detail] 835056
6.4 AT3G61800 ENTH/VHS protein [detail] 825353
Coexpressed
gene list		 [Coexpressed gene list for SMP2]
Gene expression
All samples [Expression pattern for all samples]
AtGenExpress*
(Development)
246221_at
246221_at.png

X axis is samples (pdf file), and Y axis is log2-expression.
"1st Q", "mean" and "3rd Q" indecate the values for all genes on a GeneChip. Q: quartile.

AtGenExpress*
(Stress)
246221_at
246221_at.png

X axis is samples (pdf file), and Y axis is log2-expression.
AtGenExpress*
(Hormone)
246221_at
246221_at.png

X axis is samples (xls file), and Y axis is log-expression.
Link to other DBs
Entrez Gene ID 829866      
Refseq ID (protein) NP_568017.1 


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