ATTED-II : GeneID search result

[←][→] ath AT4G37950 Gene

functional annotation

Function

Rhamnogalacturonate lyase family protein

GO BP

GO:0005975 [list] [network] carbohydrate metabolic process

(995 genes)

IEA

GO CC

GO:0005576 [list] [network] extracellular region

(3363 genes)

ISM

GO MF

GO:0030246 [list] [network] carbohydrate binding	(303 genes)	IEA
GO:0016829 [list] [network] lyase activity	(412 genes)	IEA ISS

KEGG

Protein

NP_001329850.1 NP_195508.2

BLAST

NP_001329850.1 NP_195508.2

Orthologous

[Ortholog page] AT2G22620 (ath) AT1G09890 (ath) AT1G09910 (ath) LOC4346274 (osa) LOC4346275 (osa) LOC4349697 (osa) LOC4351416 (osa) LOC7464763 (ppo) LOC7467217 (ppo) LOC7467218 (ppo) LOC7467219 (ppo) LOC7467220 (ppo) LOC7476448 (ppo) LOC7491976 (ppo) LOC11412406 (mtr) LOC11418533 (mtr) LOC11422528 (mtr) LOC11435489 (mtr) LOC11442502 (mtr) LOC100247189 (vvi) LOC100776664 (gma) LOC100786488 (gma) LOC100791732 (gma) LOC100793563 (gma) LOC100814185 (gma) LOC100814721 (gma) LOC101248195 (sly) LOC101248481 (sly) LOC101250582 (sly) LOC101260634 (sly) LOC101262208 (sly) LOC101267191 (sly) LOC103643208 (zma) LOC103654318 (zma) LOC103831399 (bra) LOC103835061 (bra) LOC103837873 (bra) LOC103871768 (bra) LOC103871769 (bra)

Subcellular
localization
wolf

chlo 3, mito 2, cyto 1, extr 1, cyto_nucl 1, mito_plas 1	(predict for NP_001329850.1)
chlo 3, mito 2, cyto 1, extr 1, cyto_nucl 1, mito_plas 1	(predict for NP_195508.2)

Subcellular
localization
TargetP

mito 6	(predict for NP_001329850.1)
mito 6	(predict for NP_195508.2)

Gene coexpression

Network^*for
coexpressed
genes

Coexpressed
gene list

[Coexpressed gene list for AT4G37950]

Gene expression

All samples

[Expression pattern for all samples]

AtGenExpress^*
(Development)

253016_at

X axis is samples (pdf file), and Y axis is log2-expression.
"1st Q", "mean" and "3rd Q" indecate the values for all genes on a GeneChip. Q: quartile.

AtGenExpress^*
(Stress)

253016_at

X axis is samples (pdf file), and Y axis is log2-expression.

AtGenExpress^*
(Hormone)

253016_at

X axis is samples (xls file), and Y axis is log-expression.

Link to other DBs
Entrez Gene ID	829951
Refseq ID (protein)	NP_001329850.1
Refseq ID (protein)	NP_195508.2

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