[←][→] ath   AT4G38460 Gene
functional annotation
Function   geranylgeranyl reductase  
GO BP
GO:0043693 [list] [network] monoterpene biosynthetic process  (4 genes)  IMP  
GO CC
GO:0009535 [list] [network] chloroplast thylakoid membrane  (373 genes)  IEA  
GO:0042651 [list] [network] thylakoid membrane  (391 genes)  IDA  
GO:0009507 [list] [network] chloroplast  (5095 genes)  IDA ISM  
GO MF
GO:0004311 [list] [network] farnesyltranstransferase activity  (18 genes)  IDA  
GO:0046872 [list] [network] metal ion binding  (3180 genes)  IEA  
GO:0005515 [list] [network] protein binding  (4605 genes)  IPI  
KEGG ath00900 [list] [network] Terpenoid backbone biosynthesis (60 genes)
Protein NP_195558.1 
BLAST NP_195558.1 
Orthologous [Ortholog page] LOC4330260 (osa)  LOC100502542 (zma)  LOC100788186 (gma)  LOC100855133 (vvi)  GGPS (sly)  LOC103653897 (zma)  LOC103850518 (bra) 
Subcellular
localization
wolf
chlo 9,  plas 1,  E.R. 1,  E.R._plas 1  (predict for NP_195558.1)
Subcellular
localization
TargetP
chlo 8  (predict for NP_195558.1)
Gene coexpression
Network*for
coexpressed
genes
LCNloc
[Cytoscape]
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ath01200 Carbon metabolism 10
ath01230 Biosynthesis of amino acids 10
ath00010 Glycolysis / Gluconeogenesis 7
ath00710 Carbon fixation in photosynthetic organisms 6
ath00030 Pentose phosphate pathway 4
Genes directly connected with GGR on the network
coex z* Locus Function* Coexpression
detail		 Entrez Gene ID*
6.2 AT1G79870 D-isomer specific 2-hydroxyacid dehydrogenase family protein [detail] 844326
5.6 PDE345 Aldolase superfamily protein [detail] 814643
5.5 AT4G00030 Plastid-lipid associated protein PAP / fibrillin family protein [detail] 828231
Coexpressed
gene list		 [Coexpressed gene list for GGR]
Gene expression
All samples [Expression pattern for all samples]
AtGenExpress*
(Development)
252996_s_at
252996_s_at.png

X axis is samples (pdf file), and Y axis is log2-expression.
"1st Q", "mean" and "3rd Q" indecate the values for all genes on a GeneChip. Q: quartile.

AtGenExpress*
(Stress)
252996_s_at
252996_s_at.png

X axis is samples (pdf file), and Y axis is log2-expression.
AtGenExpress*
(Hormone)
252996_s_at
252996_s_at.png

X axis is samples (xls file), and Y axis is log-expression.
Link to other DBs
Entrez Gene ID 830002      
Refseq ID (protein) NP_195558.1 


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