[←][→] ath   AT4G38480 Gene
functional annotation
Function   Transducin/WD40 repeat-like superfamily protein  
GO BP
GO CC
GO:0080008 [list] [network] Cul4-RING E3 ubiquitin ligase complex  (130 genes)  ISS  
GO:0005634 [list] [network] nucleus  (10793 genes)  IPI ISM  
GO MF
GO:0005515 [list] [network] protein binding  (4605 genes)  IPI  
KEGG
Protein NP_001328784.1  NP_568042.1 
BLAST NP_001328784.1  NP_568042.1 
Orthologous [Ortholog page] AT4G35140 (ath)  LOC4342101 (osa)  LOC4349273 (osa)  LOC7470422 (ppo)  LOC7474983 (ppo)  LOC25485648 (mtr)  LOC100251996 (vvi)  LOC100272942 (zma)  LOC100284249 (zma)  LOC100791300 (gma)  LOC100794236 (gma)  LOC101247968 (sly)  LOC103637246 (zma)  LOC103831116 (bra)  LOC103835183 (bra) 
Subcellular
localization
wolf
nucl 4,  cyto 3,  pero 1,  cyto_E.R. 1,  cyto_plas 1  (predict for NP_001328784.1)
nucl 4,  mito 4,  chlo 2,  cyto_nucl 2  (predict for NP_568042.1)
Subcellular
localization
TargetP
other 7,  mito 3  (predict for NP_001328784.1)
mito 4,  other 3  (predict for NP_568042.1)
Gene coexpression
Network*for
coexpressed
genes
LCNloc
[Cytoscape]
Genes directly connected with AT4G38480 on the network
coex z* Locus Function* Coexpression
detail		 Entrez Gene ID*
6.0 GCP4 GAMMA-TUBULIN COMPLEX PROTEIN 4 [detail] 824543
4.1 AT4G33140 Haloacid dehalogenase-like hydrolase (HAD) superfamily protein [detail] 829451
3.8 AT5G24390 Ypt/Rab-GAP domain of gyp1p superfamily protein [detail] 832510
Coexpressed
gene list		 [Coexpressed gene list for AT4G38480]
Gene expression
All samples [Expression pattern for all samples]
AtGenExpress*
(Development)
252994_at
252994_at.png

X axis is samples (pdf file), and Y axis is log2-expression.
"1st Q", "mean" and "3rd Q" indecate the values for all genes on a GeneChip. Q: quartile.

AtGenExpress*
(Stress)
252994_at
252994_at.png

X axis is samples (pdf file), and Y axis is log2-expression.
AtGenExpress*
(Hormone)
252994_at
252994_at.png

X axis is samples (xls file), and Y axis is log-expression.
Link to other DBs
Entrez Gene ID 830004      
Refseq ID (protein) NP_001328784.1 
NP_568042.1 


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