[←][→] ath   AT4G38930 Gene
functional annotation
Function   Ubiquitin fusion degradation UFD1 family protein  
GO BP
GO:0006511 [list] [network] ubiquitin-dependent protein catabolic process  (436 genes)  IEA  
GO CC
GO:0005634 [list] [network] nucleus  (10793 genes)  ISM  
GO MF
KEGG ath04141 [list] [network] Protein processing in endoplasmic reticulum (211 genes)
Protein NP_001328897.1  NP_001328898.1  NP_568048.1  NP_974709.1 
BLAST NP_001328897.1  NP_001328898.1  NP_568048.1  NP_974709.1 
Orthologous [Ortholog page] UFD1 (ath)  AT2G29070 (ath)  LOC4328514 (osa)  LOC4336742 (osa)  LOC7485696 (ppo)  LOC7494294 (ppo)  LOC11406565 (mtr)  LOC11412947 (mtr)  LOC11415947 (mtr)  LOC11417447 (mtr)  LOC100250217 (vvi)  LOC100258971 (vvi)  LOC100282176 (zma)  LOC100282805 (zma)  LOC100781066 (gma)  LOC100799569 (gma)  LOC100803896 (gma)  LOC100807536 (gma)  LOC101248524 (sly)  LOC103842542 (bra)  LOC103864264 (bra)  LOC103864938 (bra) 
Subcellular
localization
wolf
nucl 6,  cysk 2,  cyto 1,  mito 1  (predict for NP_001328897.1)
nucl 6,  mito 1,  cysk 1  (predict for NP_001328898.1)
nucl 6,  cysk 2,  cyto 1,  mito 1  (predict for NP_568048.1)
nucl 6,  mito 1,  cysk 1  (predict for NP_974709.1)
Subcellular
localization
TargetP
other 8  (predict for NP_001328897.1)
other 8  (predict for NP_001328898.1)
other 8  (predict for NP_568048.1)
other 8  (predict for NP_974709.1)
Gene coexpression
Network*for
coexpressed
genes
LCNloc
[Cytoscape]
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ath04141 Protein processing in endoplasmic reticulum 7
ath03050 Proteasome 5
ath04120 Ubiquitin mediated proteolysis 3
Genes directly connected with AT4G38930 on the network
coex z* Locus Function* Coexpression
detail		 Entrez Gene ID*
6.8 UFD1 ubiquitin fusion degradation 1 [detail] 816666
5.4 AT1G04960 golgin family A protein (DUF1664) [detail] 839346
4.9 AT5G63490 CBS / octicosapeptide/Phox/Bemp1 (PB1) domains-containing protein [detail] 836468
Coexpressed
gene list		 [Coexpressed gene list for AT4G38930]
Gene expression
All samples [Expression pattern for all samples]
AtGenExpress*
(Development)
252931_at
252931_at.png

X axis is samples (pdf file), and Y axis is log2-expression.
"1st Q", "mean" and "3rd Q" indecate the values for all genes on a GeneChip. Q: quartile.

AtGenExpress*
(Stress)
252931_at
252931_at.png

X axis is samples (pdf file), and Y axis is log2-expression.
AtGenExpress*
(Hormone)
252931_at
252931_at.png

X axis is samples (xls file), and Y axis is log-expression.
Link to other DBs
Entrez Gene ID 830048      
Refseq ID (protein) NP_001328897.1 
NP_001328898.1 
NP_568048.1 
NP_974709.1 


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