[←][→] ath   At4g39220 Gene
functional annotation
Function   Rer1 family protein  
GO BP
GO:0006890 [list] [network] retrograde vesicle-mediated transport, Golgi to endoplasmic reticulum  (8 genes)  IMP  
GO CC
GO:0005794 [list] [network] Golgi apparatus  (1182 genes)  IDA  
GO:0005886 [list] [network] plasma membrane  (2529 genes)  ISM  
GO MF
KEGG
Protein NP_001329643.1  NP_195633.1 
BLAST NP_001329643.1  NP_195633.1 
Orthologous [Ortholog page] RER1B (ath)  LOC4326147 (osa)  LOC4345237 (osa)  LOC7454364 (ppo)  LOC7461228 (ppo)  LOC7462592 (ppo)  LOC7464020 (ppo)  LOC7471945 (ppo)  LOC7489750 (ppo)  LOC11417142 (mtr)  LOC25493491 (mtr)  LOC100305541 (gma)  LOC100499765 (gma)  LOC100499996 (gma)  LOC100787683 (gma)  LOC100804538 (gma)  LOC100805147 (gma)  LOC100817031 (gma)  LOC101268521 (sly)  LOC103835132 (bra)  LOC103842510 (bra)  LOC103864285 (bra)  LOC104647186 (sly)  LOC107275316 (osa)  LOC123068140 (tae)  LOC123148544 (tae)  LOC123156052 (tae)  LOC123156565 (tae)  LOC123163709 (tae)  LOC123164452 (tae)  LOC123172049 (tae)  LOC123172499 (tae)  LOC123410419 (hvu)  LOC123413173 (hvu)  LOC123442350 (hvu) 
Subcellular
localization
wolf
plas 4,  E.R. 4,  golg 1  (predict for NP_001329643.1)
plas 4,  E.R. 4,  golg 1  (predict for NP_195633.1)
Subcellular
localization
TargetP
other 9  (predict for NP_001329643.1)
other 9  (predict for NP_195633.1)
Gene coexpression
Network*for
coexpressed
genes
LCNloc
[Cytoscape]
Genes directly connected with ATRER1A on the network
coex z* Locus Function* CoexViewer Entrez Gene ID*
11.3 AT3G05280 Integral membrane Yip1 family protein [detail] 819692
8.0 SCAMP3 Secretory carrier membrane protein (SCAMP) family protein [detail] 816617
7.8 RER1B endoplasmatic reticulum retrieval protein 1B [detail] 816698
6.7 AT1G22510 E3 ubiquitin-protein ligase RNF170-like protein (DUF 1232) [detail] 838857
6.5 AT2G21190 ER lumen protein retaining receptor family protein [detail] 816655
6.0 AT5G42000 ORMDL family protein [detail] 834205
5.9 AT2G24330 integral membrane metal-binding family protein (DUF2296) [detail] 816969
Coexpressed
gene list		 [Coexpressed gene list for ATRER1A]
Gene expression
All samples [Expression pattern for all samples]
AtGenExpress*
(Development)
252913_at
252913_at.png

X axis is samples (pdf file), and Y axis is log2-expression.
"1st Q", "mean" and "3rd Q" indecate the values for all genes on a GeneChip. Q: quartile.

AtGenExpress*
(Stress)
252913_at
252913_at.png

X axis is samples (pdf file), and Y axis is log2-expression.
AtGenExpress*
(Hormone)
252913_at
252913_at.png

X axis is samples (xls file), and Y axis is log-expression.
Link to other DBs
Entrez Gene ID 830077      
Refseq ID (protein) NP_001329643.1 
NP_195633.1 


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