[←][→] ath   At4g39420 Gene
functional annotation
Function   spatacsin carboxy-terminus protein      
GO BP
GO:0048646 [list] [network] anatomical structure formation involved in morphogenesis  (266 genes)  IEA  
GO:0010228 [list] [network] vegetative to reproductive phase transition of meristem  (287 genes)  IEA  
GO:0048507 [list] [network] meristem development  (457 genes)  IEA  
GO:2000241 [list] [network] regulation of reproductive process  (507 genes)  IEA  
GO:0048523 [list] [network] negative regulation of cellular process  (960 genes)  IEA  
GO:1901701 [list] [network] cellular response to oxygen-containing compound  (1115 genes)  IEA  
GO:0050793 [list] [network] regulation of developmental process  (1250 genes)  IEA  
GO:0040007 [list] [network] growth  (1270 genes)  IEA  
GO:0048367 [list] [network] shoot system development  (1318 genes)  IEA  
GO:0071310 [list] [network] cellular response to organic substance  (1485 genes)  IEA  
GO:0007165 [list] [network] signal transduction  (2054 genes)  IEA  
GO CC
GO:0005886 [list] [network] plasma membrane  (2529 genes)  HDA  
GO:0005739 [list] [network] mitochondrion  (4228 genes)  ISM  
GO MF
KEGG
Protein NP_001154293.2  NP_001328119.1  NP_001328120.1  NP_195652.5 
BLAST NP_001154293.2  NP_001328119.1  NP_001328120.1  NP_195652.5 
Orthologous [Ortholog page] LOC4325331 (osa)  LOC7457143 (ppo)  LOC7477138 (ppo)  LOC11432180 (mtr)  LOC100800361 (gma)  LOC100811665 (gma)  LOC101246131 (sly)  LOC103847160 (bra)  LOC123060434 (tae)  LOC123068972 (tae)  LOC123077503 (tae)  LOC123442956 (hvu) 
Subcellular
localization
wolf
nucl 4,  plas 4,  nucl_plas 4  (predict for NP_001154293.2)
nucl 4,  plas 4,  nucl_plas 4  (predict for NP_001328119.1)
plas 6,  nucl 2,  cyto 1,  extr 1,  pero 1,  cyto_pero 1  (predict for NP_001328120.1)
nucl 4,  plas 4,  nucl_plas 4  (predict for NP_195652.5)
Subcellular
localization
TargetP
other 7  (predict for NP_001154293.2)
other 7  (predict for NP_001328119.1)
other 3  (predict for NP_001328120.1)
other 7  (predict for NP_195652.5)
Gene coexpression
Network*for
coexpressed
genes
LCNloc
[Cytoscape]
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ath03250 Viral life cycle - HIV-1 2
Genes directly connected with AT4G39420 on the network
coex z* Locus Function* CoexViewer Entrez Gene ID*
8.9 LDL3 LSD1-like 3 [detail] 827325
7.7 UPL1 LOW protein: E3 ubiquitin ligase-like protein [detail] 842036
7.2 SDG2 SET domain protein 2 [detail] 827183
Coexpressed
gene list		 [Coexpressed gene list for AT4G39420]
Gene expression
All samples [Expression pattern for all samples]
AtGenExpress*
(Development)
252893_at
252893_at.png

X axis is samples (pdf file), and Y axis is log2-expression.
"1st Q", "mean" and "3rd Q" indecate the values for all genes on a GeneChip. Q: quartile.

AtGenExpress*
(Stress)
252893_at
252893_at.png

X axis is samples (pdf file), and Y axis is log2-expression.
AtGenExpress*
(Hormone)
252893_at
252893_at.png

X axis is samples (xls file), and Y axis is log-expression.
Link to other DBs
Entrez Gene ID 830097      
Refseq ID (protein) NP_001154293.2 
NP_001328119.1 
NP_001328120.1 
NP_195652.5 


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