[←][→] ath   At4g39550 Gene
functional annotation
Function   Galactose oxidase/kelch repeat superfamily protein    Plant GARDEN Plant GARDEN JBrowse
GO BP
GO:0007389 [list] [network] pattern specification process  (295 genes)  IEA  
GO:0016567 [list] [network] protein ubiquitination  (434 genes)  IEA  
GO:0010605 [list] [network] negative regulation of macromolecule metabolic process  (704 genes)  IEA  
GO:0044085 [list] [network] cellular component biogenesis  (1358 genes)  IEA  
GO CC
GO:0005737 [list] [network] cytoplasm  (13880 genes)  ISM  
GO MF
KEGG
Protein NP_195665.1 
BLAST NP_195665.1 
Orthologous [Ortholog page] LOC103828032 (bra)  LOC103849934 (bra) 
Subcellular
localization
wolf
nucl 7,  mito 1,  cyto 1,  chlo_mito 1,  cyto_mito 1,  golg_plas 1  (predict for NP_195665.1)
Subcellular
localization
TargetP
chlo 8  (predict for NP_195665.1)
Gene coexpression
Network*for
coexpressed
genes
LCNloc
[Cytoscape]
Genes directly connected with AT4G39550 on the network
coex z* Locus Function* Coexpression
detail		 Entrez Gene ID*
7.0 AT2G35430 Zinc finger C-x8-C-x5-C-x3-H type family protein [detail] 818109
6.7 AT4G19865 Galactose oxidase/kelch repeat superfamily protein [detail] 827732
6.5 AT5G48990 Galactose oxidase/kelch repeat superfamily protein [detail] 834958
6.3 AT2G44630 Galactose oxidase/kelch repeat superfamily protein [detail] 819071
6.0 PPD1 TIFY domain/Divergent CCT motif family protein [detail] 827123
5.8 ETP2 EIN2 targeting protein2 [detail] 821424
5.1 AT1G32760 Glutaredoxin family protein [detail] 840170
4.8 AT5G09540 Chaperone DnaJ-domain superfamily protein [detail] 830813
Coexpressed
gene list		 [Coexpressed gene list for AT4G39550]
Gene expression
All samples [Expression pattern for all samples]
AtGenExpress*
(Development)
252901_at
252901_at.png

X axis is samples (pdf file), and Y axis is log2-expression.
"1st Q", "mean" and "3rd Q" indecate the values for all genes on a GeneChip. Q: quartile.

AtGenExpress*
(Stress)
252901_at
252901_at.png

X axis is samples (pdf file), and Y axis is log2-expression.
AtGenExpress*
(Hormone)
252901_at
252901_at.png

X axis is samples (xls file), and Y axis is log-expression.
Link to other DBs
Entrez Gene ID 830109      
Refseq ID (protein) NP_195665.1 


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