[][] ath   AT4G39830 Gene
functional annotation
Function   Cupredoxin superfamily protein
GO BP
GO:1900367 [list] [network] positive regulation of defense response to insect  (6 genes)  IMP  
GO:0055114 [list] [network] oxidation-reduction process  (1468 genes)  IEA  
GO CC
GO:0005576 [list] [network] extracellular region  (3363 genes)  IEA ISM  
GO MF
GO:0005507 [list] [network] copper ion binding  (185 genes)  IEA  
GO:0016491 [list] [network] oxidoreductase activity  (1435 genes)  IBA IEA  
KEGG
Protein NP_001328440.1  NP_001328441.1  NP_001328442.1  NP_195693.1 
BLAST NP_001328440.1  NP_001328441.1  NP_001328442.1  NP_195693.1 
Orthologous [Ortholog page] B13-1-1 (gma)AO (sly)LOC4346875 (osa)LOC4347518 (osa)LOC7492955 (ppo)LOC11437438 (mtr)LOC100242403 (vvi)LOC100252644 (vvi)LOC100257784 (vvi)LOC100263656 (vvi)LOC100382137 (zma)LOC103632652 (zma)LOC103636838 (zma)LOC103839342 (bra)
Subcellular
localization
wolf
nucl 6,  cysk 3,  nucl_plas 3  (predict for NP_001328440.1)
nucl 7,  cyto 1,  chlo 1,  cysk 1,  cyto_pero 1,  cyto_E.R. 1,  cyto_plas 1  (predict for NP_001328441.1)
cysk 5,  nucl 3,  chlo 1,  cyto 1,  E.R._vacu 1  (predict for NP_001328442.1)
pero 4,  chlo 3,  nucl 3  (predict for NP_195693.1)
Subcellular
localization
TargetP
other 8  (predict for NP_001328440.1)
other 8  (predict for NP_001328441.1)
other 9  (predict for NP_001328442.1)
scret 9  (predict for NP_195693.1)
Gene coexpression
Network*for
coexpressed
genes
LCNloc
[Cytoscape]
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ath00040 Pentose and glucuronate interconversions 2
Genes directly connected with AT4G39830 on the network
coex z* Locus Function* Coexpression
detail
Entrez Gene ID*
7.2 AT5G67340 ARM repeat superfamily protein [detail] 836869
6.5 XBAT34 hypothetical protein [detail] 827080
5.9 ATPMEPCRB Plant invertase/pectin methylesterase inhibitor superfamily [detail] 828064
Coexpressed
gene list
[Coexpressed gene list for AT4G39830]
Gene expression
All samples [Expression pattern for all samples]
AtGenExpress*
(Development)
252862_at
252862_at.png

X axis is samples (pdf file), and Y axis is log2-expression.
"1st Q", "mean" and "3rd Q" indecate the values for all genes on a GeneChip. Q: quartile.

AtGenExpress*
(Stress)
252862_at
252862_at.png

X axis is samples (pdf file), and Y axis is log2-expression.

AtGenExpress*
(Hormone)
252862_at
252862_at.png

X axis is samples (xls file), and Y axis is log-expression.

Link to other DBs
Entrez Gene ID 830142    
Refseq ID (protein) NP_001328440.1 
NP_001328441.1 
NP_001328442.1 
NP_195693.1 


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