ATTED-II : GeneID search result

[←][→] ath At4g39970 Gene

functional annotation

Function

Haloacid dehalogenase-like hydrolase (HAD) superfamily protein

Plant GARDEN Plant GARDEN JBrowse

GO BP

GO CC

GO:0009941 [list] [network] chloroplast envelope	(582 genes)	HDA
GO:0009570 [list] [network] chloroplast stroma	(705 genes)	HDA
GO:0005886 [list] [network] plasma membrane	(2529 genes)	HDA
GO:0009507 [list] [network] chloroplast	(5004 genes)	HDA ISM

GO MF

KEGG

Protein

NP_568077.1

BLAST

NP_568077.1

Orthologous

[Ortholog page] LOC4345881 (osa) LOC7466800 (ppo) LOC25501884 (mtr) LOC100791840 (gma) LOC100810469 (gma) LOC101258426 (sly) LOC103835081 (bra) LOC123045886 (tae) LOC123053759 (tae) LOC123427111 (hvu)

Subcellular
localization
wolf

chlo 10

(predict for NP_568077.1)

Subcellular
localization
TargetP

chlo 9

(predict for NP_568077.1)

Gene coexpression

Network^*for
coexpressed
genes

[Cytoscape]

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
ath01200	Carbon metabolism	2

Genes directly connected with AT4G39970 on the network
coex z^*	Locus	Function^*	CoexViewer	Entrez Gene ID^*
8.7	AT3G48420	Haloacid dehalogenase-like hydrolase (HAD) superfamily protein	[detail]	824000
7.5	AT3G10060	FKBP-like peptidyl-prolyl cis-trans isomerase family protein	[detail]	820167
7.4	CSP41A	chloroplast stem-loop binding protein of 41 kDa	[detail]	825489

Coexpressed
gene list

[Coexpressed gene list for AT4G39970]

Gene expression

All samples

[Expression pattern for all samples]

AtGenExpress^*
(Development)

252876_at

X axis is samples (pdf file), and Y axis is log2-expression.
"1st Q", "mean" and "3rd Q" indecate the values for all genes on a GeneChip. Q: quartile.

AtGenExpress^*
(Stress)

252876_at

X axis is samples (pdf file), and Y axis is log2-expression.

AtGenExpress^*
(Hormone)

252876_at

X axis is samples (xls file), and Y axis is log-expression.

Link to other DBs
Entrez Gene ID	830158
Refseq ID (protein)	NP_568077.1

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