[←][→] ath   AT5G01160 Gene
functional annotation
Function   RING/U-box superfamily protein  
GO BP
GO:0080009 [list] [network] mRNA methylation  (6 genes)  IMP  
GO:0016567 [list] [network] protein ubiquitination  (624 genes)  IBA  
GO CC
GO:0016607 [list] [network] nuclear speck  (86 genes)  IEA  
GO:0005576 [list] [network] extracellular region  (3363 genes)  ISM  
GO MF
GO:0061630 [list] [network] ubiquitin protein ligase activity  (204 genes)  IBA  
GO:0046872 [list] [network] metal ion binding  (3180 genes)  IEA  
GO:0003676 [list] [network] nucleic acid binding  (4187 genes)  IEA  
GO:0005515 [list] [network] protein binding  (4605 genes)  IPI  
KEGG
Protein NP_001331186.1  NP_195736.1 
BLAST NP_001331186.1  NP_195736.1 
Orthologous [Ortholog page] LOC4348994 (osa)  LOC7468036 (ppo)  LOC25498267 (mtr)  LOC25498704 (mtr)  LOC100244343 (vvi)  LOC100274384 (zma)  LOC100274553 (zma)  LOC100803063 (gma)  LOC100817582 (gma)  LOC101255125 (sly)  LOC102668112 (gma)  LOC103847493 (bra) 
Subcellular
localization
wolf
nucl 9  (predict for NP_001331186.1)
nucl 9  (predict for NP_195736.1)
Subcellular
localization
TargetP
other 4,  mito 3  (predict for NP_001331186.1)
other 4,  mito 3  (predict for NP_195736.1)
Gene coexpression
Network*for
coexpressed
genes
LCNloc
[Cytoscape]
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ath03040 Spliceosome 3
ath00052 Galactose metabolism 2
Genes directly connected with AT5G01160 on the network
coex z* Locus Function* Coexpression
detail		 Entrez Gene ID*
9.3 CHC1 SWIB/MDM2 domain superfamily protein [detail] 831267
8.6 AT1G11480 eukaryotic translation initiation factor-like protein [detail] 837691
7.6 ESP1 hydroxyproline-rich glycoprotein family protein [detail] 843720
7.3 AT5G01020 Protein kinase superfamily protein [detail] 831918
6.9 AT5G18200 putative galactose-1-phosphate uridyltransferase [detail] 831938
6.8 AT3G63220 Galactose oxidase/kelch repeat superfamily protein [detail] 825497
6.4 FYD FYD [detail] 820437
5.5 AREB3 ABA-responsive element binding protein 3 [detail] 824852
4.6 AT2G35900 Mal d 1-associated protein [detail] 818163
4.4 PFK2 phosphofructokinase 2 [detail] 834832
Coexpressed
gene list		 [Coexpressed gene list for AT5G01160]
Gene expression
All samples [Expression pattern for all samples]
AtGenExpress*
(Development)
251138_at
251138_at.png

X axis is samples (pdf file), and Y axis is log2-expression.
"1st Q", "mean" and "3rd Q" indecate the values for all genes on a GeneChip. Q: quartile.

AtGenExpress*
(Stress)
251138_at
251138_at.png

X axis is samples (pdf file), and Y axis is log2-expression.
AtGenExpress*
(Hormone)
251138_at
251138_at.png

X axis is samples (xls file), and Y axis is log-expression.
Link to other DBs
Entrez Gene ID 831742      
Refseq ID (protein) NP_001331186.1 
NP_195736.1 


The preparation time of this page was 0.2 [sec].