[←][→] ath   At5g01160 Gene
functional annotation
Function   RING/U-box superfamily protein    Plant GARDEN Plant GARDEN JBrowse
GO BP
GO:0080009 [list] [network] mRNA methylation  (6 genes)  IMP  
GO CC
GO:0005576 [list] [network] extracellular region  (3154 genes)  ISM  
GO MF
GO:0005515 [list] [network] protein binding  (5066 genes)  IPI  
KEGG
Protein NP_001331186.1  NP_195736.1 
BLAST NP_001331186.1  NP_195736.1 
Orthologous [Ortholog page] LOC4348994 (osa)  LOC7468036 (ppo)  LOC25498267 (mtr)  LOC25498704 (mtr)  LOC100803063 (gma)  LOC100817582 (gma)  LOC101255125 (sly)  LOC102668112 (gma)  LOC103847493 (bra)  LOC123046895 (tae)  LOC123122346 (tae)  LOC123181046 (tae)  LOC123181163 (tae)  LOC123432265 (hvu) 
Subcellular
localization
wolf
nucl 9  (predict for NP_001331186.1)
nucl 9  (predict for NP_195736.1)
Subcellular
localization
TargetP
other 4,  mito 3  (predict for NP_001331186.1)
other 4,  mito 3  (predict for NP_195736.1)
Gene coexpression
Network*for
coexpressed
genes
LCNloc
[Cytoscape]
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ath03040 Spliceosome 2
ath03013 Nucleocytoplasmic transport 2
Genes directly connected with AT5G01160 on the network
coex z* Locus Function* CoexViewer Entrez Gene ID*
9.3 CHC1 SWIB/MDM2 domain superfamily protein [detail] 831267
8.0 AT4G28990 RNA-binding protein-like protein [detail] 829020
7.6 ESP1 hydroxyproline-rich glycoprotein family protein [detail] 843720
7.4 AT3G19630 Radical SAM superfamily protein [detail] 821500
7.3 AT3G13440 S-adenosyl-L-methionine-dependent methyltransferases superfamily protein [detail] 820545
6.7 D6PKL2 D6 protein kinase like 2 [detail] 834826
5.7 AT5G42560 Abscisic acid-responsive (TB2/DP1, HVA22) family protein [detail] 834262
5.5 AREB3 ABA-responsive element binding protein 3 [detail] 824852
Coexpressed
gene list		 [Coexpressed gene list for AT5G01160]
Gene expression
All samples [Expression pattern for all samples]
AtGenExpress*
(Development)
251138_at
251138_at.png

X axis is samples (pdf file), and Y axis is log2-expression.
"1st Q", "mean" and "3rd Q" indecate the values for all genes on a GeneChip. Q: quartile.

AtGenExpress*
(Stress)
251138_at
251138_at.png

X axis is samples (pdf file), and Y axis is log2-expression.
AtGenExpress*
(Hormone)
251138_at
251138_at.png

X axis is samples (xls file), and Y axis is log-expression.
Link to other DBs
Entrez Gene ID 831742      
Refseq ID (protein) NP_001331186.1 
NP_195736.1 


The preparation time of this page was 0.1 [sec].