[←][→] ath   AT5G01530 Gene
functional annotation
Function   light harvesting complex photosystem II  
GO BP
GO:0009768 [list] [network] photosynthesis, light harvesting in photosystem I  (21 genes)  IBA  
GO:0018298 [list] [network] protein-chromophore linkage  (38 genes)  IEA  
GO:0010218 [list] [network] response to far red light  (54 genes)  IEP  
GO:0010114 [list] [network] response to red light  (74 genes)  IEP  
GO:0009637 [list] [network] response to blue light  (98 genes)  IEP  
GO:0009416 [list] [network] response to light stimulus  (700 genes)  IBA  
GO CC
GO:0009522 [list] [network] photosystem I  (35 genes)  IEA  
GO:0009523 [list] [network] photosystem II  (52 genes)  IEA  
GO:0010287 [list] [network] plastoglobule  (68 genes)  IBA IDA  
GO:0009535 [list] [network] chloroplast thylakoid membrane  (373 genes)  IBA IDA  
GO:0009534 [list] [network] chloroplast thylakoid  (474 genes)  IDA  
GO:0009579 [list] [network] thylakoid  (543 genes)  IDA  
GO:0009941 [list] [network] chloroplast envelope  (666 genes)  IBA  
GO:0005886 [list] [network] plasma membrane  (3771 genes)  HDA  
GO:0016021 [list] [network] integral component of membrane  (4803 genes)  IEA  
GO:0009507 [list] [network] chloroplast  (5095 genes)  IDA ISM  
GO MF
GO:0016168 [list] [network] chlorophyll binding  (27 genes)  IEA ISS  
GO:0046872 [list] [network] metal ion binding  (3180 genes)  IEA  
KEGG ath00196 [list] [network] Photosynthesis - antenna proteins (22 genes)
Protein NP_195773.1 
BLAST NP_195773.1 
Orthologous [Ortholog page] LOC542478 (zma)  LHCB4.3 (ath)  LHCB4.2 (ath)  LOC4343583 (osa)  LOC7466067 (ppo)  LOC7487313 (ppo)  LOC7488015 (ppo)  LOC11422473 (mtr)  LOC100216729 (zma)  LOC100266604 (vvi)  LOC100785180 (gma)  LOC100785415 (gma)  LOC100794604 (gma)  LOC100820335 (gma)  LOC101249002 (sly)  LOC103850412 (bra)  LOC103866983 (bra)  LOC103870577 (bra) 
Subcellular
localization
wolf
chlo 6,  vacu 1,  nucl 1,  mito 1,  extr 1,  golg 1,  E.R._vacu 1  (predict for NP_195773.1)
Subcellular
localization
TargetP
chlo 7  (predict for NP_195773.1)
Gene coexpression
Network*for
coexpressed
genes
LCNloc
[Cytoscape]
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ath00195 Photosynthesis 12
ath00196 Photosynthesis - antenna proteins 4
Genes directly connected with LHCB4.1 on the network
coex z* Locus Function* Coexpression
detail		 Entrez Gene ID*
19.0 PSBO1 PS II oxygen-evolving complex 1 [detail] 836789
17.7 LHCA2 photosystem I light harvesting complex protein [detail] 825320
16.3 PSAL photosystem I subunit l [detail] 826892
16.1 PSAE-2 photosystem I subunit E-2 [detail] 816545
9.3 PSB27 photosystem II family protein [detail] 839449
8.2 CHLM magnesium-protoporphyrin IX methyltransferase [detail] 828611
Coexpressed
gene list		 [Coexpressed gene list for LHCB4.1]
Gene expression
All samples [Expression pattern for all samples]
AtGenExpress*
(Development)
251082_at
251082_at.png

X axis is samples (pdf file), and Y axis is log2-expression.
"1st Q", "mean" and "3rd Q" indecate the values for all genes on a GeneChip. Q: quartile.

AtGenExpress*
(Stress)
251082_at
251082_at.png

X axis is samples (pdf file), and Y axis is log2-expression.
AtGenExpress*
(Hormone)
251082_at
251082_at.png

X axis is samples (xls file), and Y axis is log-expression.
Link to other DBs
Entrez Gene ID 830325      
Refseq ID (protein) NP_195773.1 


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