[←][→] ath   AT5G01720 Gene
functional annotation
Function   RNI-like superfamily protein  
GO BP
GO:0031146 [list] [network] SCF-dependent proteasomal ubiquitin-dependent protein catabolic process  (66 genes)  IBA  
GO:0006511 [list] [network] ubiquitin-dependent protein catabolic process  (436 genes)  IBA IMP TAS  
GO:0016567 [list] [network] protein ubiquitination  (624 genes)  IMP  
GO CC
GO:0019005 [list] [network] SCF ubiquitin ligase complex  (68 genes)  IBA IPI  
GO:0005634 [list] [network] nucleus  (10793 genes)  IDA  
GO MF
GO:0004842 [list] [network] ubiquitin-protein transferase activity  (434 genes)  IBA  
KEGG
Protein NP_568094.2 
BLAST NP_568094.2 
Orthologous [Ortholog page] LOC4351279 (osa)  LOC7487347 (ppo)  LOC7498149 (ppo)  LOC9270453 (osa)  LOC25491418 (mtr)  LOC100246775 (vvi)  LOC100258428 (vvi)  LOC100791500 (gma)  LOC100803617 (gma)  LOC100812083 (gma)  LOC101243752 (sly)  LOC103647160 (zma)  LOC103651656 (zma)  LOC103855400 (bra) 
Subcellular
localization
wolf
nucl 7,  chlo 1,  mito 1,  cysk 1  (predict for NP_568094.2)
Subcellular
localization
TargetP
scret 6,  other 5  (predict for NP_568094.2)
Gene coexpression
Network*for
coexpressed
genes
LCNloc
[Cytoscape]
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ath04075 Plant hormone signal transduction 5
Genes directly connected with AT5G01720 on the network
coex z* Locus Function* Coexpression
detail		 Entrez Gene ID*
7.8 AT1G16510 SAUR-like auxin-responsive protein family [detail] 838221
7.2 AT3G12830 SAUR-like auxin-responsive protein family [detail] 820465
5.0 AT3G60690 SAUR-like auxin-responsive protein family [detail] 825240
4.4 AT5G27920 F-box family protein [detail] 832858
Coexpressed
gene list		 [Coexpressed gene list for AT5G01720]
Gene expression
All samples [Expression pattern for all samples]
AtGenExpress*
(Development)
251104_at
251104_at.png

X axis is samples (pdf file), and Y axis is log2-expression.
"1st Q", "mean" and "3rd Q" indecate the values for all genes on a GeneChip. Q: quartile.

AtGenExpress*
(Stress)
251104_at
251104_at.png

X axis is samples (pdf file), and Y axis is log2-expression.
AtGenExpress*
(Hormone)
251104_at
251104_at.png

X axis is samples (xls file), and Y axis is log-expression.
Link to other DBs
Entrez Gene ID 831688      
Refseq ID (protein) NP_568094.2 


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