[←][→] ath   At5g02310 Gene
functional annotation
Function   proteolysis 6      
GO BP
GO:0006723 [list] [network] cuticle hydrocarbon biosynthetic process  (5 genes)  IMP  
GO:0050994 [list] [network] regulation of lipid catabolic process  (10 genes)  IMP  
GO:0010025 [list] [network] wax biosynthetic process  (30 genes)  IMP  
GO:0010029 [list] [network] regulation of seed germination  (93 genes)  IMP  
GO:0006511 [list] [network] ubiquitin-dependent protein catabolic process  (230 genes)  IDA  
GO:0050832 [list] [network] defense response to fungus  (705 genes)  IMP  
GO:0042742 [list] [network] defense response to bacterium  (980 genes)  IMP  
GO:0009737 [list] [network] response to abscisic acid  (1086 genes)  IMP  
GO CC
GO:0005634 [list] [network] nucleus  (10305 genes)  ISM  
GO MF
GO:0004842 [list] [network] ubiquitin-protein transferase activity  (261 genes)  IDA  
KEGG
Protein NP_001318457.1  NP_001331954.1  NP_195851.2 
BLAST NP_001318457.1  NP_001331954.1  NP_195851.2 
Orthologous [Ortholog page] LOC4325212 (osa)  LOC7454927 (ppo)  LOC11409414 (mtr)  LOC100805660 (gma)  LOC100818009 (gma)  LOC101255129 (sly)  LOC101261865 (sly)  LOC103847459 (bra)  LOC103850443 (bra)  LOC103855459 (bra)  LOC123060139 (tae)  LOC123068614 (tae)  LOC123077144 (tae)  LOC123442688 (hvu) 
Subcellular
localization
wolf
plas 6,  nucl 2,  mito 1,  vacu 1,  E.R. 1,  E.R._vacu 1  (predict for NP_001318457.1)
plas 7,  nucl 1,  E.R. 1  (predict for NP_001331954.1)
plas 6,  nucl 2,  mito 1,  vacu 1,  E.R. 1,  E.R._vacu 1  (predict for NP_195851.2)
Subcellular
localization
TargetP
other 8  (predict for NP_001318457.1)
other 5,  mito 3  (predict for NP_001331954.1)
other 8  (predict for NP_195851.2)
Gene coexpression
Network*for
coexpressed
genes
LCNloc
[Cytoscape]
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ath04120 Ubiquitin mediated proteolysis 4
ath04136 Autophagy - other 2
Genes directly connected with PRT6 on the network
coex z* Locus Function* CoexViewer Entrez Gene ID*
11.6 TOR target of rapamycin [detail] 841427
11.4 UPL2 ubiquitin-protein ligase 2 [detail] 843368
10.7 AT5G23110 Zinc finger, C3HC4 type (RING finger) family protein [detail] 832375
8.7 ATG2 autophagy 2 [detail] 821453
8.2 UPL4 ubiquitin-protein ligase 4 [detail] 831758
7.8 AT5G15400 U-box domain-containing protein [detail] 831392
7.1 AT1G17450 B-block binding subunit of TFIIIC [detail] 838317
6.6 UPL6 ubiquitin protein ligase 6 [detail] 820979
Coexpressed
gene list		 [Coexpressed gene list for PRT6]
Gene expression
All samples [Expression pattern for all samples]
AtGenExpress*
(Development)
251042_at
251042_at.png

X axis is samples (pdf file), and Y axis is log2-expression.
"1st Q", "mean" and "3rd Q" indecate the values for all genes on a GeneChip. Q: quartile.

AtGenExpress*
(Stress)
251042_at
251042_at.png

X axis is samples (pdf file), and Y axis is log2-expression.
AtGenExpress*
(Hormone)
251042_at
251042_at.png

X axis is samples (xls file), and Y axis is log-expression.
Link to other DBs
Entrez Gene ID 830916      
Refseq ID (protein) NP_001318457.1 
NP_001331954.1 
NP_195851.2 


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