| functional annotation |
| Function |
proteolysis 6 |
|
| GO BP |
|
GO:0071596 [list] [network] ubiquitin-dependent protein catabolic process via the N-end rule pathway
|
(2 genes)
|
IBA
|
 |
|
GO:0006723 [list] [network] cuticle hydrocarbon biosynthetic process
|
(3 genes)
|
IMP
|
|
|
GO:0050994 [list] [network] regulation of lipid catabolic process
|
(10 genes)
|
IMP
|
|
|
GO:0010025 [list] [network] wax biosynthetic process
|
(23 genes)
|
IMP
|
|
|
GO:0010029 [list] [network] regulation of seed germination
|
(84 genes)
|
IMP
|
|
|
GO:0006511 [list] [network] ubiquitin-dependent protein catabolic process
|
(436 genes)
|
IDA
|
|
|
GO:0050832 [list] [network] defense response to fungus
|
(517 genes)
|
IMP
|
|
|
GO:0009737 [list] [network] response to abscisic acid
|
(574 genes)
|
IMP
|
|
|
GO:0016567 [list] [network] protein ubiquitination
|
(624 genes)
|
IBA
|
|
|
| GO CC |
|
| GO MF |
|
GO:0061630 [list] [network] ubiquitin protein ligase activity
|
(204 genes)
|
IBA
|
|
|
GO:0004842 [list] [network] ubiquitin-protein transferase activity
|
(434 genes)
|
IDA
|
|
|
| KEGG |
|
|
| Protein |
NP_001318457.1
NP_001331954.1
NP_195851.2
|
| BLAST |
NP_001318457.1
NP_001331954.1
NP_195851.2
|
| Orthologous |
[Ortholog page]
LOC4325212 (osa)
LOC11409414 (mtr)
LOC100192707 (zma)
LOC100245881 (vvi)
LOC100805660 (gma)
LOC100818009 (gma)
LOC101255129 (sly)
LOC101261865 (sly)
LOC103847459 (bra)
LOC103850443 (bra)
LOC103855459 (bra)
|
Subcellular
localization
wolf |
|
plas 6,
nucl 2,
mito 1,
vacu 1,
E.R. 1,
E.R._vacu 1
|
(predict for NP_001318457.1)
|
|
plas 7,
nucl 1,
E.R. 1
|
(predict for NP_001331954.1)
|
|
plas 6,
nucl 2,
mito 1,
vacu 1,
E.R. 1,
E.R._vacu 1
|
(predict for NP_195851.2)
|
|
Subcellular
localization
TargetP |
|
other 8
|
(predict for NP_001318457.1)
|
|
other 5,
mito 3
|
(predict for NP_001331954.1)
|
|
other 8
|
(predict for NP_195851.2)
|
|
| Gene coexpression |
Network*for
coexpressed
genes |
| KEGG* ID |
Title |
#genes |
Link to the KEGG* map
(Multiple genes) |
| ath04120 |
Ubiquitin mediated proteolysis |
4 |
 |
| ath03040 |
Spliceosome |
2 |
 |
| ath04136 |
Autophagy - other |
2 |
 |
Genes directly connected with PRT6 on the network
| coex z* |
Locus |
Function* |
Coexpression
detail |
Entrez Gene ID* |
| 11.4 |
UPL2 |
ubiquitin-protein ligase 2 |
[detail] |
843368 |
| 10.9 |
AT2G17930 |
Phosphatidylinositol 3- and 4-kinase family protein with FAT domain-containing protein |
[detail] |
816303 |
| 10.8 |
TOR |
target of rapamycin |
[detail] |
841427 |
| 7.7 |
ATG2 |
autophagy 2 |
[detail] |
821453 |
| 7.0 |
UPL6 |
ubiquitin protein ligase 6 |
[detail] |
820979 |
| 7.0 |
AT1G17450 |
B-block binding subunit of TFIIIC |
[detail] |
838317 |
| 6.9 |
AT1G48490 |
Protein kinase superfamily protein |
[detail] |
841270 |
|
Coexpressed
gene list |
[Coexpressed gene list for PRT6]
|
| Gene expression |
| All samples |
[Expression pattern for all samples]
|
AtGenExpress*
(Development) |
251042_at
X axis is samples (pdf file), and Y axis is log2-expression.
"1st Q", "mean" and "3rd Q" indecate the values for all genes on a GeneChip. Q: quartile.
|
AtGenExpress*
(Stress) |
251042_at
X axis is samples (pdf file), and Y axis is log2-expression.
|
AtGenExpress*
(Hormone) |
251042_at
X axis is samples (xls file), and Y axis is log-expression.
|
AT5G02310 Gene
