[←][→] ath   AT5G02530 Gene
functional annotation
Function   RNA-binding (RRM/RBD/RNP motifs) family protein  
GO BP
GO:0051028 [list] [network] mRNA transport  (63 genes)  IEA  
GO CC
GO:0005654 [list] [network] nucleoplasm  (444 genes)  IDA  
GO:0005886 [list] [network] plasma membrane  (3771 genes)  HDA  
GO MF
GO:0003729 [list] [network] mRNA binding  (1026 genes)  IDA  
GO:0005515 [list] [network] protein binding  (4605 genes)  IPI  
KEGG ath03013 [list] [network] RNA transport (171 genes)
ath03015 [list] [network] mRNA surveillance pathway (115 genes)
ath03040 [list] [network] Spliceosome (192 genes)
Protein NP_001190207.1  NP_195873.2 
BLAST NP_001190207.1  NP_195873.2 
Orthologous [Ortholog page] AT5G59950 (ath)  LOC4332426 (osa)  LOC4342793 (osa)  LOC4349526 (osa)  LOC4351236 (osa)  LOC7469811 (ppo)  LOC11446087 (mtr)  LOC25492480 (mtr)  LOC100193488 (zma)  LOC100257081 (vvi)  LOC100258168 (vvi)  LOC100272743 (zma)  LOC100278324 (zma)  LOC100279524 (zma)  LOC100775827 (gma)  LOC100783362 (gma)  LOC100785926 (gma)  LOC100817317 (gma)  LOC101262878 (sly)  LOC101266904 (sly)  LOC102663782 (gma)  LOC103845414 (bra)  LOC103847441 (bra)  LOC103851533 (bra)  LOC103855473 (bra) 
Subcellular
localization
wolf
mito 5,  cyto 2,  nucl 1,  cysk 1,  cysk_nucl 1  (predict for NP_001190207.1)
mito 5,  cyto 2,  nucl 1,  cysk 1,  cysk_nucl 1  (predict for NP_195873.2)
Subcellular
localization
TargetP
other 7,  chlo 6  (predict for NP_001190207.1)
other 7,  chlo 6  (predict for NP_195873.2)
Gene coexpression
Network*for
coexpressed
genes
LCNloc
[Cytoscape]
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ath03040 Spliceosome 10
ath03015 mRNA surveillance pathway 4
ath03013 RNA transport 3
Genes directly connected with AT5G02530 on the network
coex z* Locus Function* Coexpression
detail		 Entrez Gene ID*
8.5 CSP3 cold shock domain protein 3 [detail] 816297
7.8 AT2G33410 RNA-binding (RRM/RBD/RNP motifs) family protein [detail] 817905
7.3 RSZ22 serine/arginine-rich 22 [detail] 829285
6.7 EBS PHD finger family protein / bromo-adjacent homology (BAH) domain-containing protein [detail] 828303
Coexpressed
gene list		 [Coexpressed gene list for AT5G02530]
Gene expression
All samples [Expression pattern for all samples]
AtGenExpress*
(Development)
250996_at
250996_at.png

X axis is samples (pdf file), and Y axis is log2-expression.
"1st Q", "mean" and "3rd Q" indecate the values for all genes on a GeneChip. Q: quartile.

AtGenExpress*
(Stress)
250996_at
250996_at.png

X axis is samples (pdf file), and Y axis is log2-expression.
AtGenExpress*
(Hormone)
250996_at
250996_at.png

X axis is samples (xls file), and Y axis is log-expression.
Link to other DBs
Entrez Gene ID 831923      
Refseq ID (protein) NP_001190207.1 
NP_195873.2 


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