[←][→] ath   AT5G02820 Gene
functional annotation
Function   Spo11/DNA topoisomerase VI, subunit A protein  
GO BP
GO:0000737 [list] [network] DNA catabolic process, endonucleolytic  (3 genes)  IEA  
GO:0000706 [list] [network] meiotic DNA double-strand break processing  (4 genes)  IBA  
GO:0009957 [list] [network] epidermal cell fate specification  (6 genes)  IMP  
GO:0042138 [list] [network] meiotic DNA double-strand break formation  (9 genes)  IBA  
GO:0007131 [list] [network] reciprocal meiotic recombination  (49 genes)  IBA  
GO CC
GO:0005694 [list] [network] chromosome  (348 genes)  IEA  
GO:0005634 [list] [network] nucleus  (10793 genes)  IDA ISM  
GO MF
GO:0003918 [list] [network] DNA topoisomerase type II (double strand cut, ATP-hydrolyzing) activity  (9 genes)  TAS  
GO:0016889 [list] [network] endodeoxyribonuclease activity, producing 3'-phosphomonoesters  (10 genes)  IBA  
GO:0042802 [list] [network] identical protein binding  (288 genes)  IPI  
GO:0005524 [list] [network] ATP binding  (2003 genes)  IEA  
GO:0003677 [list] [network] DNA binding  (2280 genes)  IBA  
GO:0005515 [list] [network] protein binding  (4605 genes)  IPI  
KEGG
Protein NP_195902.1 
BLAST NP_195902.1 
Orthologous [Ortholog page] LOC4332468 (osa)  LOC4332469 (osa)  LOC25484058 (mtr)  LOC100260201 (vvi)  LOC100273699 (zma)  LOC100778158 (gma)  LOC100782577 (gma)  LOC101260755 (sly)  LOC103847420 (bra) 
Subcellular
localization
wolf
nucl 5,  cyto_nucl 4,  cyto 2,  pero 1,  cysk 1,  golg_plas 1  (predict for NP_195902.1)
Subcellular
localization
TargetP
other 8  (predict for NP_195902.1)
Gene coexpression
Network*for
coexpressed
genes
LCNloc
[Cytoscape]
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ath03430 Mismatch repair 4
ath03030 DNA replication 3
ath03420 Nucleotide excision repair 3
ath03008 Ribosome biogenesis in eukaryotes 3
Genes directly connected with RHL2 on the network
coex z* Locus Function* Coexpression
detail		 Entrez Gene ID*
5.6 STRS2 DEA(D/H)-box RNA helicase family protein [detail] 830763
5.5 RFC2 replication factor C 2 [detail] 842620
5.5 AT2G06040 F-box/LRR protein [detail] 815159
4.1 UBC37 ubiquitin-conjugating enzyme 37 [detail] 822045
2.1 AT5G53700 RNA-binding (RRM/RBD/RNP motifs) family protein [detail] 835451
Coexpressed
gene list		 [Coexpressed gene list for RHL2]
Gene expression
All samples [Expression pattern for all samples]
AtGenExpress*
(Development)
250974_at
250974_at.png

X axis is samples (pdf file), and Y axis is log2-expression.
"1st Q", "mean" and "3rd Q" indecate the values for all genes on a GeneChip. Q: quartile.

AtGenExpress*
(Stress)
250974_at
250974_at.png

X axis is samples (pdf file), and Y axis is log2-expression.
AtGenExpress*
(Hormone)
250974_at
250974_at.png

X axis is samples (xls file), and Y axis is log-expression.
Link to other DBs
Entrez Gene ID 831314      
Refseq ID (protein) NP_195902.1 


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