[←][→] ath   AT5G02850 Gene
functional annotation
Function   hydroxyproline-rich glycoprotein family protein  
GO BP
GO:0006357 [list] [network] regulation of transcription by RNA polymerase II  (334 genes)  IBA  
GO CC
GO:0070847 [list] [network] core mediator complex  (8 genes)  IBA  
GO:0016592 [list] [network] mediator complex  (43 genes)  IDA  
GO:0005634 [list] [network] nucleus  (10793 genes)  ISM  
GO MF
GO:0003712 [list] [network] transcription coregulator activity  (111 genes)  IBA  
GO:0005515 [list] [network] protein binding  (4605 genes)  IPI  
KEGG
Protein NP_195905.1 
BLAST NP_195905.1 
Orthologous [Ortholog page] LOC4347726 (osa)  LOC7467601 (ppo)  LOC11426971 (mtr)  LOC11438689 (mtr)  LOC100249946 (vvi)  LOC100277397 (zma)  LOC100278821 (zma)  LOC100796958 (gma)  LOC100812071 (gma)  LOC100812941 (gma)  LOC101244543 (sly)  LOC101246818 (sly)  LOC103847418 (bra) 
Subcellular
localization
wolf
chlo 9  (predict for NP_195905.1)
Subcellular
localization
TargetP
chlo 6  (predict for NP_195905.1)
Gene coexpression
Network*for
coexpressed
genes
LCNloc
[Cytoscape]
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ath03040 Spliceosome 3
ath03013 RNA transport 3
ath03022 Basal transcription factors 2
Genes directly connected with AT5G02850 on the network
coex z* Locus Function* Coexpression
detail		 Entrez Gene ID*
7.7 MAC5A CCCH-type zinc fingerfamily protein with RNA-binding domain-containing protein [detail] 837248
7.1 AT5G51300 splicing factor-like protein [detail] 835204
7.1 AT4G37130 hydroxyproline-rich glycoprotein family protein [detail] 829867
6.3 AT1G04930 hydroxyproline-rich glycoprotein family protein [detail] 839377
5.8 TAFII21 TATA binding protein associated factor 21kDa subunit [detail] 841854
5.7 PBRP plant-specific TFIIB-related protein [detail] 829817
5.0 AT2G32840 proline-rich family protein [detail] 817845
3.9 AT2G32235 hypothetical protein [detail] 817783
Coexpressed
gene list		 [Coexpressed gene list for AT5G02850]
Gene expression
All samples [Expression pattern for all samples]
AtGenExpress*
(Development)
250986_at
250986_at.png

X axis is samples (pdf file), and Y axis is log2-expression.
"1st Q", "mean" and "3rd Q" indecate the values for all genes on a GeneChip. Q: quartile.

AtGenExpress*
(Stress)
250986_at
250986_at.png

X axis is samples (pdf file), and Y axis is log2-expression.
AtGenExpress*
(Hormone)
250986_at
250986_at.png

X axis is samples (xls file), and Y axis is log-expression.
Link to other DBs
Entrez Gene ID 831762      
Refseq ID (protein) NP_195905.1 


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