[←][→] ath   AT5G02880 Gene
functional annotation
Function   ubiquitin-protein ligase 4  
GO BP
GO:0016567 [list] [network] protein ubiquitination  (624 genes)  IEA ISS  
GO CC
GO:0000151 [list] [network] ubiquitin ligase complex  (277 genes)  ISS  
GO:0005634 [list] [network] nucleus  (10793 genes)  ISM  
GO:0005737 [list] [network] cytoplasm  (14855 genes)  ISM  
GO MF
GO:0004842 [list] [network] ubiquitin-protein transferase activity  (434 genes)  IEA ISS  
KEGG ath04120 [list] [network] Ubiquitin mediated proteolysis (143 genes)
Protein NP_001331961.1  NP_195908.1 
BLAST NP_001331961.1  NP_195908.1 
Orthologous [Ortholog page] LOC4339037 (osa)  LOC7467604 (ppo)  LOC25484050 (mtr)  LOC100243094 (vvi)  LOC100793534 (gma)  LOC100798530 (gma)  LOC101257890 (sly)  LOC103635779 (zma)  LOC103850463 (bra)  LOC103855501 (bra) 
Subcellular
localization
wolf
nucl 3,  chlo 2,  E.R. 2,  cysk_nucl 2,  mito 1,  plas 1,  vacu 1,  mito_plas 1  (predict for NP_001331961.1)
nucl 3,  chlo 2,  E.R. 2,  cysk_nucl 2,  mito 1,  plas 1,  vacu 1,  mito_plas 1  (predict for NP_195908.1)
Subcellular
localization
TargetP
other 6  (predict for NP_001331961.1)
other 6  (predict for NP_195908.1)
Gene coexpression
Network*for
coexpressed
genes
LCNloc
[Cytoscape]
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ath04136 Autophagy - other 2
ath04120 Ubiquitin mediated proteolysis 2
Genes directly connected with UPL4 on the network
coex z* Locus Function* Coexpression
detail		 Entrez Gene ID*
9.2 AT2G17930 Phosphatidylinositol 3- and 4-kinase family protein with FAT domain-containing protein [detail] 816303
8.9 TOR target of rapamycin [detail] 841427
8.8 EMB2773 PHD finger family protein [detail] 831407
8.6 VPS15 protein kinase family protein / WD-40 repeat family protein [detail] 829059
7.1 AT1G22930 T-complex protein 11 [detail] 838900
5.7 MTM1 Myotubularin-like phosphatases II superfamily [detail] 820220
4.2 AT5G63930 Leucine-rich repeat protein kinase family protein [detail] 836514
Coexpressed
gene list		 [Coexpressed gene list for UPL4]
Gene expression
All samples [Expression pattern for all samples]
AtGenExpress*
(Development)
250988_at
250988_at.png

X axis is samples (pdf file), and Y axis is log2-expression.
"1st Q", "mean" and "3rd Q" indecate the values for all genes on a GeneChip. Q: quartile.

AtGenExpress*
(Stress)
250988_at
250988_at.png

X axis is samples (pdf file), and Y axis is log2-expression.
AtGenExpress*
(Hormone)
250988_at
250988_at.png

X axis is samples (xls file), and Y axis is log-expression.
Link to other DBs
Entrez Gene ID 831758      
Refseq ID (protein) NP_001331961.1 
NP_195908.1 


The preparation time of this page was 0.2 [sec].