[←][→] ath   At5g03940 Gene
functional annotation
Function   chloroplast signal recognition particle 54 kDa subunit    Plant GARDEN Plant GARDEN JBrowse
GO BP
GO:0006614 [list] [network] SRP-dependent cotranslational protein targeting to membrane  (7 genes)  IEA  
GO:0045038 [list] [network] protein import into chloroplast thylakoid membrane  (7 genes)  IDA  
GO CC
GO:0080085 [list] [network] signal recognition particle, chloroplast targeting  (2 genes)  IMP  
GO:0009570 [list] [network] chloroplast stroma  (705 genes)  HDA IDA  
GO:0005886 [list] [network] plasma membrane  (2529 genes)  HDA  
GO:0009507 [list] [network] chloroplast  (5004 genes)  HDA ISM  
GO MF
GO:0008312 [list] [network] 7S RNA binding  (4 genes)  IEA  
GO:0005048 [list] [network] signal sequence binding  (15 genes)  IDA  
GO:0003924 [list] [network] GTPase activity  (79 genes)  IEA  
GO:0005515 [list] [network] protein binding  (5066 genes)  IPI  
KEGG ath03060 [list] [network] Protein export (54 genes)
Protein NP_196014.1 
BLAST NP_196014.1 
Orthologous [Ortholog page] LOC4349809 (osa)  LOC7465265 (ppo)  LOC7492249 (ppo)  LOC9267495 (osa)  LOC11433065 (mtr)  LOC100782581 (gma)  LOC101251215 (sly)  LOC103847347 (bra)  LOC103850524 (bra)  LOC121174134 (gma)  LOC123086496 (tae)  LOC123086497 (tae)  LOC123091497 (tae)  LOC123091498 (tae)  LOC123096461 (tae)  LOC123448046 (hvu)  LOC123448047 (hvu) 
Subcellular
localization
wolf
chlo 10  (predict for NP_196014.1)
Subcellular
localization
TargetP
chlo 9  (predict for NP_196014.1)
Gene coexpression
Network*for
coexpressed
genes
LCNloc
[Cytoscape]
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ath03060 Protein export 3
Genes directly connected with CPSRP54 on the network
coex z* Locus Function* CoexViewer Entrez Gene ID*
10.5 ALB1 ALBINA 1 [detail] 837374
10.1 AT3G49140 Pentatricopeptide repeat (PPR) superfamily protein [detail] 824075
9.9 AT4G39040 RNA-binding CRS1 / YhbY (CRM) domain protein [detail] 830059
7.9 AGY1 Albino or Glassy Yellow 1 [detail] 827922
7.8 CYP97B3 cytochrome P450, family 97, subfamily B, polypeptide 3 [detail] 827177
Coexpressed
gene list		 [Coexpressed gene list for CPSRP54]
Gene expression
All samples [Expression pattern for all samples]
AtGenExpress*
(Development)
250884_at
250884_at.png

X axis is samples (pdf file), and Y axis is log2-expression.
"1st Q", "mean" and "3rd Q" indecate the values for all genes on a GeneChip. Q: quartile.

AtGenExpress*
(Stress)
250884_at
250884_at.png

X axis is samples (pdf file), and Y axis is log2-expression.
AtGenExpress*
(Hormone)
250884_at
250884_at.png

X axis is samples (xls file), and Y axis is log-expression.
Link to other DBs
Entrez Gene ID 830273      
Refseq ID (protein) NP_196014.1 


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