[←][→] ath   AT5G03940 Gene
functional annotation
Function   chloroplast signal recognition particle 54 kDa subunit  
GO BP
GO:0045038 [list] [network] protein import into chloroplast thylakoid membrane  (6 genes)  IDA  
GO:0006614 [list] [network] SRP-dependent cotranslational protein targeting to membrane  (20 genes)  IEA  
GO CC
GO:0080085 [list] [network] signal recognition particle, chloroplast targeting  (2 genes)  IMP  
GO:0005786 [list] [network] signal recognition particle, endoplasmic reticulum targeting  (10 genes)  IEA  
GO:0009570 [list] [network] chloroplast stroma  (750 genes)  IDA  
GO:0005886 [list] [network] plasma membrane  (3771 genes)  HDA  
GO:0009507 [list] [network] chloroplast  (5095 genes)  IDA ISM  
GO MF
GO:0008312 [list] [network] 7S RNA binding  (9 genes)  IEA  
GO:0005048 [list] [network] signal sequence binding  (49 genes)  IDA  
GO:0003924 [list] [network] GTPase activity  (169 genes)  IEA  
GO:0005525 [list] [network] GTP binding  (248 genes)  IEA  
GO:0005515 [list] [network] protein binding  (4605 genes)  IPI  
KEGG ath03060 [list] [network] Protein export (54 genes)
Protein NP_196014.1 
BLAST NP_196014.1 
Orthologous [Ortholog page] LOC4349809 (osa)  LOC7465265 (ppo)  LOC9267495 (osa)  LOC11433065 (mtr)  LOC100247624 (vvi)  LOC100274153 (zma)  LOC100782581 (gma)  LOC101251215 (sly)  LOC103654352 (zma)  LOC103847347 (bra)  LOC103850524 (bra) 
Subcellular
localization
wolf
chlo 10  (predict for NP_196014.1)
Subcellular
localization
TargetP
chlo 9  (predict for NP_196014.1)
Gene coexpression
Network*for
coexpressed
genes
LCNloc
[Cytoscape]
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ath03060 Protein export 2
ath00860 Porphyrin and chlorophyll metabolism 2
Genes directly connected with CPSRP54 on the network
coex z* Locus Function* Coexpression
detail		 Entrez Gene ID*
10.6 AT3G49140 Pentatricopeptide repeat (PPR) superfamily protein [detail] 824075
9.9 emb2726 elongation factor Ts family protein [detail] 829027
9.7 ALB1 ALBINA 1 [detail] 837374
9.4 AT4G39040 RNA-binding CRS1 / YhbY (CRM) domain protein [detail] 830059
7.6 CYP97B3 cytochrome P450, family 97, subfamily B, polypeptide 3 [detail] 827177
Coexpressed
gene list		 [Coexpressed gene list for CPSRP54]
Gene expression
All samples [Expression pattern for all samples]
AtGenExpress*
(Development)
250884_at
250884_at.png

X axis is samples (pdf file), and Y axis is log2-expression.
"1st Q", "mean" and "3rd Q" indecate the values for all genes on a GeneChip. Q: quartile.

AtGenExpress*
(Stress)
250884_at
250884_at.png

X axis is samples (pdf file), and Y axis is log2-expression.
AtGenExpress*
(Hormone)
250884_at
250884_at.png

X axis is samples (xls file), and Y axis is log-expression.
Link to other DBs
Entrez Gene ID 830273      
Refseq ID (protein) NP_196014.1 


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