[←][→] ath   At5g04140 Gene
functional annotation
Function   glutamate synthase 1    Plant GARDEN Plant GARDEN JBrowse
GO BP
GO:0080114 [list] [network] positive regulation of glycine hydroxymethyltransferase activity  (1 genes)  IDA  
GO:0009853 [list] [network] photorespiration  (41 genes)  IMP TAS  
GO:0009744 [list] [network] response to sucrose  (74 genes)  IEP  
GO:0009416 [list] [network] response to light stimulus  (1981 genes)  IEP  
GO CC
GO:0048046 [list] [network] apoplast  (305 genes)  HDA  
GO:0009941 [list] [network] chloroplast envelope  (582 genes)  HDA  
GO:0009570 [list] [network] chloroplast stroma  (705 genes)  HDA  
GO:0005886 [list] [network] plasma membrane  (2529 genes)  HDA  
GO:0005739 [list] [network] mitochondrion  (4228 genes)  IDA  
GO:0009507 [list] [network] chloroplast  (5004 genes)  HDA IDA ISM  
GO MF
GO:0016041 [list] [network] glutamate synthase (ferredoxin) activity  (2 genes)  IDA ISS  
GO:0003729 [list] [network] mRNA binding  (1535 genes)  IDA  
GO:0005515 [list] [network] protein binding  (5066 genes)  IPI  
KEGG ath00630 [list] [network] Glyoxylate and dicarboxylate metabolism (78 genes)
ath00910 [list] [network] Nitrogen metabolism (43 genes)
Protein NP_568134.1  NP_850763.1 
BLAST NP_568134.1  NP_850763.1 
Orthologous [Ortholog page] LOC548016 (gma)  GLU2 (ath)  LOC4344164 (osa)  LOC7458925 (ppo)  LOC7495696 (ppo)  LOC11415038 (mtr)  LOC100809299 (gma)  LOC101246028 (sly)  LOC103847326 (bra)  LOC103857972 (bra)  LOC103865867 (bra)  LOC123043871 (tae)  LOC123051744 (tae)  LOC123187649 (tae)  LOC123424922 (hvu) 
Subcellular
localization
wolf
chlo 6,  cyto 3  (predict for NP_568134.1)
chlo 6,  cyto 3,  chlo_mito 3  (predict for NP_850763.1)
Subcellular
localization
TargetP
chlo 8  (predict for NP_568134.1)
chlo 8  (predict for NP_850763.1)
Gene coexpression
Network*for
coexpressed
genes
LCNloc
[Cytoscape]
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ath00630 Glyoxylate and dicarboxylate metabolism 9
ath01200 Carbon metabolism 8
ath00260 Glycine, serine and threonine metabolism 4
ath00710 Carbon fixation in photosynthetic organisms 3
ath01230 Biosynthesis of amino acids 3
Genes directly connected with GLU1 on the network
coex z* Locus Function* CoexViewer Entrez Gene ID*
9.5 PMDH2 peroxisomal NAD-malate dehydrogenase 2 [detail] 830825
9.4 GS2 glutamine synthetase 2 [detail] 833535
9.4 SHM1 serine transhydroxymethyltransferase 1 [detail] 829949
Coexpressed
gene list		 [Coexpressed gene list for GLU1]
Gene expression
All samples [Expression pattern for all samples]
AtGenExpress*
(Development)
245701_at
245701_at.png

X axis is samples (pdf file), and Y axis is log2-expression.
"1st Q", "mean" and "3rd Q" indecate the values for all genes on a GeneChip. Q: quartile.

AtGenExpress*
(Stress)
245701_at
245701_at.png

X axis is samples (pdf file), and Y axis is log2-expression.
AtGenExpress*
(Hormone)
245701_at
245701_at.png

X axis is samples (xls file), and Y axis is log-expression.
Link to other DBs
Entrez Gene ID 830292      
Refseq ID (protein) NP_568134.1 
NP_850763.1 


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