[←][→] ath   At5g04460 Gene
functional annotation
Function   RING/U-box superfamily protein    Plant GARDEN Plant GARDEN JBrowse
GO BP
GO:0046700 [list] [network] heterocycle catabolic process  (123 genes)  IEA  
GO:0044270 [list] [network] cellular nitrogen compound catabolic process  (124 genes)  IEA  
GO:0019439 [list] [network] aromatic compound catabolic process  (137 genes)  IEA  
GO:1901361 [list] [network] organic cyclic compound catabolic process  (149 genes)  IEA  
GO:0009892 [list] [network] negative regulation of metabolic process  (1067 genes)  IEA  
GO:0050793 [list] [network] regulation of developmental process  (1250 genes)  IEA  
GO CC
GO:0005737 [list] [network] cytoplasm  (13880 genes)  ISM  
GO MF
GO:0032183 [list] [network] SUMO binding  (14 genes)  IPI  
GO:0080115 [list] [network] myosin XI tail binding  (15 genes)  IDA  
KEGG
Protein NP_001190224.1  NP_001190225.1  NP_001318480.1  NP_001331156.1  NP_001331157.1  NP_196066.2 
BLAST NP_001190224.1  NP_001190225.1  NP_001318480.1  NP_001331156.1  NP_001331157.1  NP_196066.2 
Orthologous [Ortholog page] AT2G27950 (ath)  LOC4331196 (osa)  LOC4331330 (osa)  LOC7463470 (ppo)  LOC7496464 (ppo)  LOC18098262 (ppo)  LOC18101342 (ppo)  LOC25484842 (mtr)  LOC25487467 (mtr)  LOC25492361 (mtr)  LOC100784174 (gma)  LOC100801329 (gma)  LOC100803851 (gma)  LOC100804184 (gma)  LOC100804887 (gma)  LOC100805607 (gma)  LOC101260292 (sly)  LOC101261337 (sly)  LOC101264699 (sly)  LOC103829693 (bra)  LOC103847289 (bra)  LOC103847499 (bra)  LOC103870459 (bra)  LOC123089624 (tae)  LOC123100640 (tae)  LOC123108446 (tae)  LOC123129087 (tae)  LOC123139982 (tae)  LOC123146256 (tae)  LOC123402156 (hvu)  LOC123446805 (hvu)  LOC123447475 (hvu) 
Subcellular
localization
wolf
nucl 10  (predict for NP_001190224.1)
nucl 10  (predict for NP_001190225.1)
nucl 10  (predict for NP_001318480.1)
nucl 10  (predict for NP_001331156.1)
nucl 9  (predict for NP_001331157.1)
nucl 10  (predict for NP_196066.2)
Subcellular
localization
TargetP
other 8  (predict for NP_001190224.1)
other 8  (predict for NP_001190225.1)
other 8  (predict for NP_001318480.1)
other 8  (predict for NP_001331156.1)
other 8  (predict for NP_001331157.1)
other 8  (predict for NP_196066.2)
Gene coexpression
Network*for
coexpressed
genes
LCNloc
[Cytoscape]
Genes directly connected with AT5G04460 on the network
coex z* Locus Function* Coexpression
detail		 Entrez Gene ID*
6.9 AT5G16680 RING/FYVE/PHD zinc finger superfamily protein [detail] 831529
6.3 OTLD1 OTU-like cysteine protease family protein [detail] 817278
6.2 AT5G43560 TRAF-like superfamily protein [detail] 834376
6.1 AT4G16070 lipase class 3 family protein [detail] 827292
4.1 ATHXK4 Hexokinase [detail] 821543
Coexpressed
gene list		 [Coexpressed gene list for AT5G04460]
Gene expression
All samples [Expression pattern for all samples]
AtGenExpress*
(Development)
250888_at
250888_at.png

X axis is samples (pdf file), and Y axis is log2-expression.
"1st Q", "mean" and "3rd Q" indecate the values for all genes on a GeneChip. Q: quartile.

AtGenExpress*
(Stress)
250888_at
250888_at.png

X axis is samples (pdf file), and Y axis is log2-expression.
AtGenExpress*
(Hormone)
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250888_at.png

X axis is samples (xls file), and Y axis is log-expression.
Link to other DBs
Entrez Gene ID 830324      
Refseq ID (protein) NP_001190224.1 
NP_001190225.1 
NP_001318480.1 
NP_001331156.1 
NP_001331157.1 
NP_196066.2 


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