[←][→] ath   AT5G04560 Gene
functional annotation
Function   HhH-GPD base excision DNA repair family protein  
GO BP
GO:0006349 [list] [network] regulation of gene expression by genetic imprinting  (14 genes)  IMP  
GO:0006284 [list] [network] base-excision repair  (25 genes)  IEA  
GO:0006306 [list] [network] DNA methylation  (50 genes)  IDA  
GO:0009793 [list] [network] embryo development ending in seed dormancy  (547 genes)  IMP  
GO CC
GO:0043078 [list] [network] polar nucleus  (6 genes)  IDA  
GO:0005634 [list] [network] nucleus  (10793 genes)  ISM ISS  
GO MF
GO:0003906 [list] [network] DNA-(apurinic or apyrimidinic site) endonuclease activity  (13 genes)  IDA  
GO:0019104 [list] [network] DNA N-glycosylase activity  (22 genes)  IDA ISS  
GO:0051539 [list] [network] 4 iron, 4 sulfur cluster binding  (81 genes)  IEA  
GO:0003677 [list] [network] DNA binding  (2280 genes)  IEA  
GO:0046872 [list] [network] metal ion binding  (3180 genes)  IEA  
KEGG
Protein NP_001078527.1  NP_001331593.1  NP_196076.2 
BLAST NP_001078527.1  NP_001331593.1  NP_196076.2 
Orthologous [Ortholog page] DML1 (ath)  LOC4329402 (osa)  LOC9271145 (osa)  LOC25483895 (mtr)  LOC25485813 (mtr)  LOC25499391 (mtr)  LOC100247223 (vvi)  LOC100257983 (vvi)  LOC100280151 (zma)  LOC100779756 (gma)  LOC100783992 (gma)  LOC100787368 (gma)  LOC100788292 (gma)  LOC100806794 (gma)  DML1 (sly)  DML3 (sly)  DML2 (sly)  LOC103847276 (bra)  LOC103867278 (bra)  LOC109939959 (zma) 
Subcellular
localization
wolf
nucl 10  (predict for NP_001078527.1)
nucl 10  (predict for NP_001331593.1)
nucl 10  (predict for NP_196076.2)
Subcellular
localization
TargetP
other 7,  mito 4  (predict for NP_001078527.1)
other 7,  chlo 4  (predict for NP_001331593.1)
other 7,  chlo 4  (predict for NP_196076.2)
Gene coexpression
Network*for
coexpressed
genes
LCNloc
[Cytoscape]
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ath04144 Endocytosis 2
Genes directly connected with DME on the network
coex z* Locus Function* Coexpression
detail		 Entrez Gene ID*
10.3 SYD P-loop containing nucleoside triphosphate hydrolases superfamily protein [detail] 817375
8.1 AT3G60860 SEC7-like guanine nucleotide exchange family protein [detail] 825257
7.5 BRM transcription regulatory protein SNF2 [detail] 819210
5.9 AT1G63740 Disease resistance protein (TIR-NBS-LRR class) family [detail] 842678
5.8 AT5G61190 putative endonuclease or glycosyl hydrolase with C2H2-type zinc finger domain-containing protein [detail] 836240
5.7 AT5G65440 transmembrane protein [detail] 836669
4.9 AT1G26130 ATPase E1-E2 type family protein / haloacid dehalogenase-like hydrolase family protein [detail] 839154
4.8 DML2 demeter-like 2 [detail] 820162
Coexpressed
gene list		 [Coexpressed gene list for DME]
Gene expression
All samples [Expression pattern for all samples]
AtGenExpress*
(Development)
250836_at
250836_at.png

X axis is samples (pdf file), and Y axis is log2-expression.
"1st Q", "mean" and "3rd Q" indecate the values for all genes on a GeneChip. Q: quartile.

AtGenExpress*
(Stress)
250836_at
250836_at.png

X axis is samples (pdf file), and Y axis is log2-expression.
AtGenExpress*
(Hormone)
250836_at
250836_at.png

X axis is samples (xls file), and Y axis is log-expression.
Link to other DBs
Entrez Gene ID 830335      
Refseq ID (protein) NP_001078527.1 
NP_001331593.1 
NP_196076.2 


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