[←][→] ath   At5g06160 Gene
functional annotation
Function   splicing factor-like protein      
GO BP
GO:0045694 [list] [network] regulation of embryo sac egg cell differentiation  (2 genes)  IMP  
GO CC
GO:0005634 [list] [network] nucleus  (10305 genes)  ISM  
GO MF
GO:0008270 [list] [network] zinc ion binding  (429 genes)  IEA  
GO:0005515 [list] [network] protein binding  (5066 genes)  IPI  
KEGG ath03040 [list] [network] Spliceosome (203 genes)
Protein NP_196234.3 
BLAST NP_196234.3 
Orthologous [Ortholog page] LOC4333915 (osa)  LOC7453827 (ppo)  LOC7489842 (ppo)  LOC11418483 (mtr)  LOC18110282 (ppo)  LOC100815393 (gma)  LOC100820038 (gma)  LOC101254575 (sly)  LOC103850610 (bra)  LOC103855659 (bra)  LOC123061862 (tae)  LOC123070555 (tae)  LOC123078965 (tae)  LOC123147659 (tae)  LOC123164330 (tae)  LOC123444123 (hvu) 
Subcellular
localization
wolf
cyto 6,  nucl 4  (predict for NP_196234.3)
Subcellular
localization
TargetP
other 7  (predict for NP_196234.3)
Gene coexpression
Network*for
coexpressed
genes
LCNloc
[Cytoscape]
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ath03040 Spliceosome 2
ath03013 Nucleocytoplasmic transport 2
ath03015 mRNA surveillance pathway 2
Genes directly connected with ATO on the network
coex z* Locus Function* CoexViewer Entrez Gene ID*
8.2 AT1G28060 Pre-mRNA-splicing factor 3 [detail] 839699
7.7 EMB2777 Sas10/U3 ribonucleoprotein (Utp) family protein [detail] 818967
7.7 AT5G35910 Polynucleotidyl transferase, ribonuclease H fold protein with HRDC domain-containing protein [detail] 833577
7.5 GLE1 nucleoporin GLE1-like protein [detail] 837869
6.8 IPT2 tRNAisopentenyltransferase 2 [detail] 817322
6.6 SWI3A SWITCH/sucrose nonfermenting 3A [detail] 819375
Coexpressed
gene list		 [Coexpressed gene list for ATO]
Gene expression
All samples [Expression pattern for all samples]
AtGenExpress*
(Development)
250715_at
250715_at.png

X axis is samples (pdf file), and Y axis is log2-expression.
"1st Q", "mean" and "3rd Q" indecate the values for all genes on a GeneChip. Q: quartile.

AtGenExpress*
(Stress)
250715_at
250715_at.png

X axis is samples (pdf file), and Y axis is log2-expression.
AtGenExpress*
(Hormone)
250715_at
250715_at.png

X axis is samples (xls file), and Y axis is log-expression.
Link to other DBs
Entrez Gene ID 830503      
Refseq ID (protein) NP_196234.3 


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