[←][→] ath   At5g06260 Gene
functional annotation
Function   TLD-domain containing nucleolar protein      
GO BP
GO:0030163 [list] [network] protein catabolic process  (321 genes)  IEA  
GO:0010035 [list] [network] response to inorganic substance  (2100 genes)  IEA  
GO CC
GO:0005739 [list] [network] mitochondrion  (4228 genes)  ISM  
GO:0009507 [list] [network] chloroplast  (5004 genes)  ISM  
GO MF
GO:0005509 [list] [network] calcium ion binding  (132 genes)  IEA  
KEGG
Protein NP_001330374.1  NP_001330375.1  NP_196244.1 
BLAST NP_001330374.1  NP_001330375.1  NP_196244.1 
Orthologous [Ortholog page] AT4G34070 (ath)  LOC4351549 (osa)  LOC7492227 (ppo)  LOC25499440 (mtr)  LOC100788439 (gma)  LOC100804508 (gma)  LOC101251635 (sly)  LOC103846965 (bra)  LOC123102981 (tae)  LOC123111132 (tae)  LOC123120136 (tae)  LOC123452862 (hvu) 
Subcellular
localization
wolf
nucl 5,  cyto 3,  nucl_plas 3  (predict for NP_001330374.1)
chlo 6,  chlo_mito 4,  mito 1,  nucl 1  (predict for NP_001330375.1)
nucl 6,  cyto_nucl 4,  plas 1,  golg_plas 1  (predict for NP_196244.1)
Subcellular
localization
TargetP
other 8  (predict for NP_001330374.1)
chlo 6  (predict for NP_001330375.1)
other 4,  chlo 4  (predict for NP_196244.1)
Gene coexpression
Network*for
coexpressed
genes
LCNloc
[Cytoscape]
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ath04136 Autophagy - other 2
ath04144 Endocytosis 2
Genes directly connected with AT5G06260 on the network
coex z* Locus Function* CoexViewer Entrez Gene ID*
9.1 AT3G55070 LisH/CRA/RING-U-box domains-containing protein [detail] 824673
8.5 SGR4 Vesicle transport v-SNARE family protein [detail] 833947
7.7 TDX tetraticopeptide domain-containing thioredoxin [detail] 821056
7.1 AT5G11680 classical AGP protein [detail] 831040
6.8 GSNAP gamma-soluble NSF attachment protein [detail] 827789
6.0 AT5G35690 zinc metalloproteinase-like protein [detail] 833542
Coexpressed
gene list		 [Coexpressed gene list for AT5G06260]
Gene expression
All samples [Expression pattern for all samples]
AtGenExpress*
(Development)
250675_at
250675_at.png

X axis is samples (pdf file), and Y axis is log2-expression.
"1st Q", "mean" and "3rd Q" indecate the values for all genes on a GeneChip. Q: quartile.

AtGenExpress*
(Stress)
250675_at
250675_at.png

X axis is samples (pdf file), and Y axis is log2-expression.
AtGenExpress*
(Hormone)
250675_at
250675_at.png

X axis is samples (xls file), and Y axis is log-expression.
Link to other DBs
Entrez Gene ID 830513      
Refseq ID (protein) NP_001330374.1 
NP_001330375.1 
NP_196244.1 


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