[←][→] ath   At5g06680 Gene
functional annotation
Function   spindle pole body component 98      
GO BP
GO:0090063 [list] [network] positive regulation of microtubule nucleation  (2 genes)  IDA  
GO:0007020 [list] [network] microtubule nucleation  (9 genes)  TAS  
GO:0009624 [list] [network] response to nematode  (86 genes)  IDA  
GO CC
GO:0000930 [list] [network] gamma-tubulin complex  (3 genes)  IDA  
GO:0009898 [list] [network] cytoplasmic side of plasma membrane  (24 genes)  IDA  
GO:0055028 [list] [network] cortical microtubule  (45 genes)  IDA  
GO:0005819 [list] [network] spindle  (53 genes)  IDA  
GO:0005938 [list] [network] cell cortex  (72 genes)  IDA  
GO:0005635 [list] [network] nuclear envelope  (98 genes)  IDA  
GO:0005874 [list] [network] microtubule  (105 genes)  IDA  
GO:0005737 [list] [network] cytoplasm  (13880 genes)  IDA  
GO MF
GO:0015631 [list] [network] tubulin binding  (90 genes)  ISS  
GO:0005515 [list] [network] protein binding  (5066 genes)  IPI  
KEGG
Protein NP_196286.1 
BLAST NP_196286.1 
Orthologous [Ortholog page] LOC4347202 (osa)  LOC7455634 (ppo)  LOC7488037 (ppo)  LOC11437941 (mtr)  LOC100784710 (gma)  LOC100811956 (gma)  LOC101243735 (sly)  LOC103850631 (bra)  LOC123103918 (tae)  LOC123112152 (tae)  LOC123121662 (tae)  LOC123132195 (tae)  LOC123136225 (tae)  LOC123143729 (tae)  LOC123398410 (hvu)  LOC123403059 (hvu) 
Subcellular
localization
wolf
nucl 4,  chlo 2,  cyto 2,  cysk_nucl 2  (predict for NP_196286.1)
Subcellular
localization
TargetP
other 7,  chlo 3  (predict for NP_196286.1)
Gene coexpression
Network*for
coexpressed
genes
LCNloc
[Cytoscape]
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ath03013 Nucleocytoplasmic transport 2
Genes directly connected with SPC98 on the network
coex z* Locus Function* CoexViewer Entrez Gene ID*
6.5 AT3G08947 ARM repeat superfamily protein [detail] 3768765
6.4 PUM2 pumilio 2 [detail] 817468
6.2 AT5G10020 Leucine-rich receptor-like protein kinase family protein [detail] 830865
6.0 AT1G27190 Leucine-rich repeat protein kinase family protein [detail] 839608
5.8 AT1G78880 Ubiquitin-specific protease family C19-related protein [detail] 844225
Coexpressed
gene list		 [Coexpressed gene list for SPC98]
Gene expression
All samples [Expression pattern for all samples]
AtGenExpress*
(Development)
250686_at
250686_at.png

X axis is samples (pdf file), and Y axis is log2-expression.
"1st Q", "mean" and "3rd Q" indecate the values for all genes on a GeneChip. Q: quartile.

AtGenExpress*
(Stress)
250686_at
250686_at.png

X axis is samples (pdf file), and Y axis is log2-expression.
AtGenExpress*
(Hormone)
250686_at
250686_at.png

X axis is samples (xls file), and Y axis is log-expression.
Link to other DBs
Entrez Gene ID 830557      
Refseq ID (protein) NP_196286.1 


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