[][] ath   AT5G07410 Gene
functional annotation
Function   Pectin lyase-like superfamily protein
GO BP
GO:0009846 [list] [network] pollen germination  (67 genes)  IMP  
GO:0045490 [list] [network] pectin catabolic process  (96 genes)  IBA IEA  
GO:0042545 [list] [network] cell wall modification  (176 genes)  IEA  
GO CC
GO:0090406 [list] [network] pollen tube  (80 genes)  IDA  
GO:0005618 [list] [network] cell wall  (685 genes)  IEA  
GO:0005576 [list] [network] extracellular region  (3363 genes)  IEA ISM  
GO MF
GO:0045330 [list] [network] aspartyl esterase activity  (67 genes)  IEA  
GO:0030599 [list] [network] pectinesterase activity  (86 genes)  IBA IMP  
KEGG
Protein NP_568181.1 
BLAST NP_568181.1 
Orthologous [Ortholog page] AT5G07420 (ath)AT5G07430 (ath)AT5G61680 (ath)PPME1 (ath)LOC7456677 (ppo)LOC25479538 (mtr)LOC25479539 (mtr)LOC25487202 (mtr)LOC25492829 (mtr)LOC100242572 (vvi)LOC100244050 (vvi)LOC100263101 (vvi)LOC100264859 (vvi)LOC100266527 (vvi)LOC100306177 (gma)LOC100775404 (gma)LOC100786427 (gma)LOC100790786 (gma)LOC100813174 (gma)LOC100816036 (gma)LOC101243787 (sly)LOC101244375 (sly)LOC103847059 (bra)LOC103847061 (bra)LOC103847880 (bra)LOC103850654 (bra)LOC103850655 (bra)LOC103855725 (bra)LOC103860618 (bra)
Subcellular
localization
wolf
extr 5,  vacu 2,  chlo 1,  cyto 1,  golg 1,  chlo_mito 1  (predict for NP_568181.1)
Subcellular
localization
TargetP
scret 8  (predict for NP_568181.1)
Gene coexpression
Network*for
coexpressed
genes
LCNloc
[Cytoscape]
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ath00040 Pentose and glucuronate interconversions 5
Genes directly connected with AT5G07410 on the network
coex z* Locus Function* Coexpression
detail
Entrez Gene ID*
19.2 AT3G14040 Pectin lyase-like superfamily protein [detail] 820618
16.2 RALFL8 ralf-like 8 [detail] 842451
15.9 RALFL15 RALF-like 15 [detail] 28718292
15.6 sks11 SKU5 similar 11 [detail] 820539
14.0 AT3G07850 Pectin lyase-like superfamily protein [detail] 819976
13.6 AT3G28790 transmembrane protein, putative (DUF1216) [detail] 822511
Coexpressed
gene list
[Coexpressed gene list for AT5G07410]
Gene expression
All samples [Expression pattern for all samples]
Link to other DBs
Entrez Gene ID 830632    
Refseq ID (protein) NP_568181.1 


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