[←][→] ath   AT5G07660 Gene
functional annotation
Function   structural maintenance of chromosomes 6A  
GO BP
GO:0010165 [list] [network] response to X-ray  (8 genes)  IMP  
GO:0007062 [list] [network] sister chromatid cohesion  (35 genes)  IMP  
GO:0000724 [list] [network] double-strand break repair via homologous recombination  (68 genes)  IMP  
GO CC
GO:0030915 [list] [network] Smc5-Smc6 complex  (8 genes)  IEA  
GO:0005634 [list] [network] nucleus  (10793 genes)  IEA ISM  
GO MF
GO:0005524 [list] [network] ATP binding  (2003 genes)  IEA  
KEGG
Protein NP_196383.1 
BLAST NP_196383.1 
Orthologous [Ortholog page] MIM (ath)  LOC9267891 (osa)  LOC11412113 (mtr)  LOC25491907 (mtr)  LOC100249449 (vvi)  LOC100383441 (zma)  LOC100816916 (gma)  LOC101253591 (sly)  LOC103850664 (bra)  LOC103860596 (bra) 
Subcellular
localization
wolf
cyto 6,  nucl 4  (predict for NP_196383.1)
Subcellular
localization
TargetP
other 8,  chlo 3  (predict for NP_196383.1)
Gene coexpression
Network*for
coexpressed
genes
LCNloc
[Cytoscape]
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ath03030 DNA replication 7
ath03440 Homologous recombination 4
ath03410 Base excision repair 3
ath03420 Nucleotide excision repair 3
ath03430 Mismatch repair 2
Genes directly connected with SMC6A on the network
coex z* Locus Function* Coexpression
detail		 Entrez Gene ID*
8.3 MIM P-loop containing nucleoside triphosphate hydrolases superfamily protein [detail] 836267
8.2 CTF18 P-loop containing nucleoside triphosphate hydrolases superfamily protein [detail] 839431
8.1 ORC3 origin recognition complex subunit 3 [detail] 831530
Coexpressed
gene list		 [Coexpressed gene list for SMC6A]
Gene expression
All samples [Expression pattern for all samples]
AtGenExpress*
(Development)
250588_at
250588_at.png

X axis is samples (pdf file), and Y axis is log2-expression.
"1st Q", "mean" and "3rd Q" indecate the values for all genes on a GeneChip. Q: quartile.

AtGenExpress*
(Stress)
250588_at
250588_at.png

X axis is samples (pdf file), and Y axis is log2-expression.
AtGenExpress*
(Hormone)
250588_at
250588_at.png

X axis is samples (xls file), and Y axis is log-expression.
Link to other DBs
Entrez Gene ID 830659      
Refseq ID (protein) NP_196383.1 


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