[←][→] ath   At5g08560 Gene
functional annotation
Function   transducin family protein / WD-40 repeat family protein      
GO BP
GO:0009646 [list] [network] response to absence of light  (50 genes)  IDA  
GO:0010150 [list] [network] leaf senescence  (195 genes)  IDA  
GO:0009723 [list] [network] response to ethylene  (241 genes)  IMP  
GO:0009733 [list] [network] response to auxin  (384 genes)  IMP  
GO:0006970 [list] [network] response to osmotic stress  (883 genes)  IMP  
GO:0009737 [list] [network] response to abscisic acid  (1086 genes)  IMP  
GO:0009416 [list] [network] response to light stimulus  (1981 genes)  IMP  
GO CC
GO:0005634 [list] [network] nucleus  (10305 genes)  IDA  
GO:0005737 [list] [network] cytoplasm  (13880 genes)  IDA ISM  
GO MF
GO:0005515 [list] [network] protein binding  (5066 genes)  IPI  
KEGG
Protein NP_001078546.1  NP_001318513.1  NP_196473.1 
BLAST NP_001078546.1  NP_001318513.1  NP_196473.1 
Orthologous [Ortholog page] LOC7464664 (ppo)  LOC7468716 (ppo)  LOC9266581 (osa)  LOC11426741 (mtr)  LOC25490564 (mtr)  LOC100780502 (gma)  LOC100781300 (gma)  LOC100802844 (gma)  LOC100813925 (gma)  LOC101248217 (sly)  LOC101258261 (sly)  LOC101267507 (sly)  LOC103847170 (bra)  LOC103855800 (bra)  LOC123102448 (tae)  LOC123110624 (tae)  LOC123119648 (tae)  LOC123147465 (tae)  LOC123164100 (tae)  LOC123400098 (hvu)  LOC123407382 (hvu) 
Subcellular
localization
wolf
nucl 9,  cyto 1  (predict for NP_001078546.1)
nucl 9,  cyto 1  (predict for NP_001318513.1)
nucl 9,  cyto 1  (predict for NP_196473.1)
Subcellular
localization
TargetP
other 5,  chlo 4  (predict for NP_001078546.1)
other 5,  chlo 4  (predict for NP_001318513.1)
other 5,  chlo 4  (predict for NP_196473.1)
Gene coexpression
Network*for
coexpressed
genes
LCNloc
[Cytoscape]
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ath04136 Autophagy - other 2
ath04141 Protein processing in endoplasmic reticulum 2
Genes directly connected with AT5G08560 on the network
coex z* Locus Function* CoexViewer Entrez Gene ID*
7.0 AL2 alfin-like 2 [detail] 820290
6.8 APG9 autophagy 9 (APG9) [detail] 817683
6.4 ATG18H autophagy 18h-like protein [detail] 841912
Coexpressed
gene list		 [Coexpressed gene list for AT5G08560]
Gene expression
All samples [Expression pattern for all samples]
AtGenExpress*
(Development)
250539_at
250539_at.png

X axis is samples (pdf file), and Y axis is log2-expression.
"1st Q", "mean" and "3rd Q" indecate the values for all genes on a GeneChip. Q: quartile.

AtGenExpress*
(Stress)
250539_at
250539_at.png

X axis is samples (pdf file), and Y axis is log2-expression.
AtGenExpress*
(Hormone)
250539_at
250539_at.png

X axis is samples (xls file), and Y axis is log-expression.
Link to other DBs
Entrez Gene ID 830756      
Refseq ID (protein) NP_001078546.1 
NP_001318513.1 
NP_196473.1 


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