[←][→] ath   At5g08600 Gene
functional annotation
Function   U3 ribonucleoprotein (Utp) family protein      
GO BP
GO:0006364 [list] [network] rRNA processing  (169 genes)  IEA  
GO CC
GO:0005634 [list] [network] nucleus  (10305 genes)  ISM  
GO MF
KEGG ath03008 [list] [network] Ribosome biogenesis in eukaryotes (96 genes)
Protein NP_001190265.1  NP_001331282.1  NP_196477.1 
BLAST NP_001190265.1  NP_001331282.1  NP_196477.1 
Orthologous [Ortholog page] AT4G02400 (ath)  LOC4332800 (osa)  LOC7478845 (ppo)  LOC7491296 (ppo)  LOC11423401 (mtr)  LOC100784007 (gma)  LOC100811431 (gma)  LOC101245392 (sly)  LOC103836750 (bra)  LOC103868214 (bra)  LOC123147891 (tae)  LOC123156232 (tae)  LOC123164685 (tae)  LOC123413484 (hvu) 
Subcellular
localization
wolf
nucl 7,  cyto 2  (predict for NP_001190265.1)
nucl 5,  cyto 3,  cysk_nucl 3,  nucl_plas 3  (predict for NP_001331282.1)
nucl 7,  cyto 2  (predict for NP_196477.1)
Subcellular
localization
TargetP
chlo 3,  mito 3  (predict for NP_001190265.1)
chlo 3,  mito 3  (predict for NP_001331282.1)
chlo 3,  mito 3  (predict for NP_196477.1)
Gene coexpression
Network*for
coexpressed
genes
LCNloc
[Cytoscape]
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ath03008 Ribosome biogenesis in eukaryotes 2
Genes directly connected with AT5G08600 on the network
coex z* Locus Function* CoexViewer Entrez Gene ID*
7.0 AT5G05990 Mitochondrial glycoprotein family protein [detail] 830486
6.5 AT5G65850 F-box and associated interaction domains-containing protein [detail] 836714
6.3 AT5G44490 FBD, F-box, Skp2-like and Leucine Rich Repeat domains containing protein [detail] 834476
6.3 AT3G62460 Putative endonuclease or glycosyl hydrolase [detail] 825420
5.8 AT5G27230 Frigida-like protein [detail] 832781
Coexpressed
gene list		 [Coexpressed gene list for AT5G08600]
Gene expression
All samples [Expression pattern for all samples]
AtGenExpress*
(Development)
250528_at
250528_at.png

X axis is samples (pdf file), and Y axis is log2-expression.
"1st Q", "mean" and "3rd Q" indecate the values for all genes on a GeneChip. Q: quartile.

AtGenExpress*
(Stress)
250528_at
250528_at.png

X axis is samples (pdf file), and Y axis is log2-expression.
AtGenExpress*
(Hormone)
250528_at
250528_at.png

X axis is samples (xls file), and Y axis is log-expression.
Link to other DBs
Entrez Gene ID 830761      
Refseq ID (protein) NP_001190265.1 
NP_001331282.1 
NP_196477.1 


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