[←][→] ath   At5g09380 Gene
functional annotation
Function   RNA polymerase III RPC4    Plant GARDEN Plant GARDEN JBrowse
GO BP
GO:0006383 [list] [network] transcription by RNA polymerase III  (9 genes)  IEA  
GO CC
GO:0005666 [list] [network] RNA polymerase III complex  (2 genes)  IEA  
GO:0005634 [list] [network] nucleus  (10305 genes)  ISM  
GO MF
GO:0003677 [list] [network] DNA binding  (1277 genes)  IEA  
KEGG ath03020 [list] [network] RNA polymerase (52 genes)
Protein NP_001318517.1  NP_001332087.1  NP_001332088.1 
BLAST NP_001318517.1  NP_001332087.1  NP_001332088.1 
Orthologous [Ortholog page] AT4G25180 (ath)  LOC4335691 (osa)  LOC7465496 (ppo)  LOC11405592 (mtr)  LOC18099314 (ppo)  LOC18100354 (ppo)  LOC25491881 (mtr)  LOC100782982 (gma)  LOC100787575 (gma)  LOC100802173 (gma)  LOC100817982 (gma)  LOC101251183 (sly)  LOC101254492 (sly)  LOC103847203 (bra)  LOC103862974 (bra)  LOC123091069 (tae)  LOC123096081 (tae)  LOC123113539 (tae)  LOC123180569 (tae)  LOC123191762 (tae)  LOC123425982 (hvu)  LOC123447740 (hvu) 
Subcellular
localization
wolf
chlo 9  (predict for NP_001318517.1)
nucl 4,  cyto 4,  chlo 1  (predict for NP_001332087.1)
cyto 5,  nucl 4,  chlo 1,  plas 1  (predict for NP_001332088.1)
Subcellular
localization
TargetP
mito 4  (predict for NP_001318517.1)
other 5,  chlo 4  (predict for NP_001332087.1)
other 5,  chlo 4  (predict for NP_001332088.1)
Gene coexpression
Network*for
coexpressed
genes
LCNloc
[Cytoscape]
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ath03020 RNA polymerase 2
ath03010 Ribosome 2
Genes directly connected with AT5G09380 on the network
coex z* Locus Function* Coexpression
detail		 Entrez Gene ID*
7.7 AT3G25940 TFIIB zinc-binding protein [detail] 822191
7.0 AT4G38100 CURVATURE THYLAKOID 1D-like protein [detail] 829966
6.9 AT5G52380 VASCULAR-RELATED NAC-DOMAIN 6 [detail] 835314
6.0 AT1G09660 RNA-binding KH domain-containing protein [detail] 837494
5.9 AT5G43140 Peroxisomal membrane 22 kDa (Mpv17/PMP22) family protein [detail] 834331
5.8 AT3G47630 translocator assembly/maintenance protein [detail] 823917
5.8 AT5G44450 alpha amino-terminal protein methyltransferase [detail] 834472
5.6 ECT11 evolutionarily conserved C-terminal region 11 [detail] 837511
Coexpressed
gene list		 [Coexpressed gene list for AT5G09380]
Gene expression
All samples [Expression pattern for all samples]
AtGenExpress*
(Development)
245909_at
245909_at.png

X axis is samples (pdf file), and Y axis is log2-expression.
"1st Q", "mean" and "3rd Q" indecate the values for all genes on a GeneChip. Q: quartile.

AtGenExpress*
(Stress)
245909_at
245909_at.png

X axis is samples (pdf file), and Y axis is log2-expression.
AtGenExpress*
(Hormone)
245909_at
245909_at.png

X axis is samples (xls file), and Y axis is log-expression.
Link to other DBs
Entrez Gene ID 830797      
Refseq ID (protein) NP_001318517.1 
NP_001332087.1 
NP_001332088.1 


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