[][] ath   AT5G10560 Gene
functional annotation
Function   Glycosyl hydrolase family protein
GO BP
GO:0031222 [list] [network] arabinan catabolic process  (8 genes)  IBA  
GO:0045493 [list] [network] xylan catabolic process  (13 genes)  IBA  
GO CC
GO:0009505 [list] [network] plant-type cell wall  (220 genes)  IBA  
GO:0005774 [list] [network] vacuolar membrane  (624 genes)  IDA  
GO:0005773 [list] [network] vacuole  (1133 genes)  IDA  
GO:0005576 [list] [network] extracellular region  (3363 genes)  IEA  
GO:0005829 [list] [network] cytosol  (3506 genes)  HDA  
GO MF
GO:0009044 [list] [network] xylan 1,4-beta-xylosidase activity  (12 genes)  IBA TAS  
GO:0046556 [list] [network] alpha-L-arabinofuranosidase activity  (12 genes)  IBA  
KEGG
Protein NP_196618.1 
BLAST NP_196618.1 
Orthologous [Ortholog page] LOC4336485 (osa)LOC7472700 (ppo)LOC11426255 (mtr)LOC100258853 (vvi)LOC100381616 (zma)LOC100783609 (gma)LOC101251532 (sly)LOC103846795 (bra)
Subcellular
localization
wolf
vacu 2,  chlo 1,  E.R. 1,  golg 1,  nucl 1,  cyto 1,  mito 1,  plas 1,  extr 1,  cyto_nucl 1,  nucl_plas 1,  mito_plas 1,  cyto_plas 1  (predict for NP_196618.1)
Subcellular
localization
TargetP
scret 3  (predict for NP_196618.1)
Gene coexpression
Network*for
coexpressed
genes
LCNloc
[Cytoscape]
Genes directly connected with AT5G10560 on the network
coex z* Locus Function* Coexpression
detail
Entrez Gene ID*
5.6 HEXO2 beta-hexosaminidase 2 [detail] 837064
5.5 YSL4 YELLOW STRIPE like 4 [detail] 834102
5.4 AT3G19400 Cysteine proteinases superfamily protein [detail] 821474
5.3 AT3G54790 ARM repeat superfamily protein [detail] 824644
5.0 TBL35 TRICHOME BIREFRINGENCE-LIKE 35 [detail] 831716
4.9 scpl26 serine carboxypeptidase-like 26 [detail] 818150
Coexpressed
gene list
[Coexpressed gene list for AT5G10560]
Gene expression
All samples [Expression pattern for all samples]
AtGenExpress*
(Development)
250444_at
250444_at.png

X axis is samples (pdf file), and Y axis is log2-expression.
"1st Q", "mean" and "3rd Q" indecate the values for all genes on a GeneChip. Q: quartile.

AtGenExpress*
(Stress)
250444_at
250444_at.png

X axis is samples (pdf file), and Y axis is log2-expression.

AtGenExpress*
(Hormone)
250444_at
250444_at.png

X axis is samples (xls file), and Y axis is log-expression.

Link to other DBs
Entrez Gene ID 830921    
Refseq ID (protein) NP_196618.1 


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