[][] ath   At5g11980 Gene
functional annotation
Function   conserved oligomeric Golgi complex component-related / COG complex component-like protein Plant GARDENPlant GARDEN JBrowse
GO BP
GO:0007030 [list] [network] Golgi organization  (15 genes)  IMP  
GO:0048193 [list] [network] Golgi vesicle transport  (67 genes)  IMP  
GO:0009860 [list] [network] pollen tube growth  (149 genes)  IMP  
GO CC
GO:0017119 [list] [network] Golgi transport complex  (11 genes)  IPI  
GO:0009506 [list] [network] plasmodesma  (871 genes)  HDA  
GO:0005794 [list] [network] Golgi apparatus  (1182 genes)  ISM  
GO MF
GO:0042803 [list] [network] protein homodimerization activity  (227 genes)  IDA  
GO:0005515 [list] [network] protein binding  (5066 genes)  IPI  
KEGG
Protein NP_001330277.1  NP_568256.1 
BLAST NP_001330277.1  NP_568256.1 
Orthologous [Ortholog page] LOC4352423 (osa)LOC7470682 (ppo)LOC11440543 (mtr)LOC100781620 (gma)LOC100788776 (gma)LOC101254422 (sly)LOC103850806 (bra)LOC103855950 (bra)LOC123102633 (tae)LOC123110819 (tae)LOC123119821 (tae)LOC123396646 (hvu)
Subcellular
localization
wolf
cyto 5,  nucl 4  (predict for NP_001330277.1)
nucl 4,  cyto 4,  cyto_nucl 4  (predict for NP_568256.1)
Subcellular
localization
TargetP
other 5  (predict for NP_001330277.1)
other 5  (predict for NP_568256.1)
Gene coexpression
Network*for
coexpressed
genes
LCNloc
[Cytoscape]
Genes directly connected with AT5G11980 on the network
coex z* Locus Function* CoexViewer Entrez Gene ID*
10.3 ACBP4 acyl-CoA binding protein 4 [detail] 819707
8.8 AT1G04910 O-fucosyltransferase family protein [detail] 839373
8.5 AT4G24840 oligomeric golgi complex subunit-like protein [detail] 828587
8.4 AT1G79990 coatomer subunit beta-2 [detail] 844339
8.3 AT5G41950 Tetratricopeptide repeat (TPR)-like superfamily protein [detail] 834200
7.1 AUG2 HAUS augmin-like complex subunit [detail] 817860
7.0 AT5G04420 Galactose oxidase/kelch repeat superfamily protein [detail] 830321
6.9 AT5G64600 O-fucosyltransferase family protein [detail] 836581
6.8 AKR4C11 NAD(P)-linked oxidoreductase superfamily protein [detail] 824555
6.2 AT4G33945 ARM repeat superfamily protein [detail] 829540
5.0 AT1G14710 hydroxyproline-rich glycoprotein family protein [detail] 838036
Coexpressed
gene list
[Coexpressed gene list for AT5G11980]
Gene expression
All samples [Expression pattern for all samples]
AtGenExpress*
(Development)
250297_at
250297_at.png

X axis is samples (pdf file), and Y axis is log2-expression.
"1st Q", "mean" and "3rd Q" indecate the values for all genes on a GeneChip. Q: quartile.

AtGenExpress*
(Stress)
250297_at
250297_at.png

X axis is samples (pdf file), and Y axis is log2-expression.

AtGenExpress*
(Hormone)
250297_at
250297_at.png

X axis is samples (xls file), and Y axis is log-expression.

Link to other DBs
Entrez Gene ID 831071    
Refseq ID (protein) NP_001330277.1 
NP_568256.1 


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