[←][→] ath   At5g12100 Gene
functional annotation
Function   pentatricopeptide (PPR) repeat-containing protein    Plant GARDEN Plant GARDEN JBrowse
GO BP
GO CC
GO:0005739 [list] [network] mitochondrion  (4228 genes)  ISM  
GO MF
GO:0008270 [list] [network] zinc ion binding  (429 genes)  HDA  
KEGG
Protein NP_196771.1 
BLAST NP_196771.1 
Orthologous [Ortholog page] LOC7469483 (ppo)  LOC25499387 (mtr)  LOC100786292 (gma)  LOC101256754 (sly)  LOC102660535 (gma)  LOC103846668 (bra)  LOC121172636 (gma) 
Subcellular
localization
wolf
chlo 6,  chlo_mito 5,  mito 3,  cyto_mito 1  (predict for NP_196771.1)
Subcellular
localization
TargetP
mito 8  (predict for NP_196771.1)
Gene coexpression
Network*for
coexpressed
genes
LCNloc
[Cytoscape]
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ath03015 mRNA surveillance pathway 3
ath03040 Spliceosome 2
ath03250 Viral life cycle - HIV-1 2
Genes directly connected with AT5G12100 on the network
coex z* Locus Function* CoexViewer Entrez Gene ID*
6.3 AT3G29310 calmodulin-binding protein-like protein [detail] 822589
6.1 AT5G55670 RNA-binding (RRM/RBD/RNP motifs) family protein [detail] 835661
5.6 AT5G45790 Ubiquitin carboxyl-terminal hydrolase family protein [detail] 834619
Coexpressed
gene list		 [Coexpressed gene list for AT5G12100]
Gene expression
All samples [Expression pattern for all samples]
AtGenExpress*
(Development)
250303_at
250303_at.png

X axis is samples (pdf file), and Y axis is log2-expression.
"1st Q", "mean" and "3rd Q" indecate the values for all genes on a GeneChip. Q: quartile.

AtGenExpress*
(Stress)
250303_at
250303_at.png

X axis is samples (pdf file), and Y axis is log2-expression.
AtGenExpress*
(Hormone)
250303_at
250303_at.png

X axis is samples (xls file), and Y axis is log-expression.
Link to other DBs
Entrez Gene ID 831083      
Refseq ID (protein) NP_196771.1 


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