[←][→] ath   AT5G13010 Gene
functional annotation
Function   RNA helicase family protein  
GO BP
GO:0031053 [list] [network] primary miRNA processing  (12 genes)  IMP  
GO:0031334 [list] [network] positive regulation of protein complex assembly  (37 genes)  IGI  
GO:0009817 [list] [network] defense response to fungus, incompatible interaction  (50 genes)  IMP  
GO:0048767 [list] [network] root hair elongation  (66 genes)  IGI  
GO:0010051 [list] [network] xylem and phloem pattern formation  (73 genes)  IMP  
GO:0000398 [list] [network] mRNA splicing, via spliceosome  (172 genes)  IBA  
GO:0008380 [list] [network] RNA splicing  (272 genes)  IMP  
GO:0009793 [list] [network] embryo development ending in seed dormancy  (547 genes)  IMP NAS  
GO CC
GO:0005634 [list] [network] nucleus  (10793 genes)  IDA ISM  
GO MF
GO:0003723 [list] [network] RNA binding  (1790 genes)  IBA  
KEGG ath03040 [list] [network] Spliceosome (192 genes)
Protein NP_196805.2 
BLAST NP_196805.2 
Orthologous [Ortholog page] LOC4343339 (osa)  LOC11423262 (mtr)  LOC25489050 (mtr)  LOC100261447 (vvi)  LOC100804199 (gma)  LOC100817761 (gma)  LOC101253638 (sly)  LOC101259321 (sly)  LOC103647704 (zma)  LOC103850838 (bra) 
Subcellular
localization
wolf
nucl 9  (predict for NP_196805.2)
Subcellular
localization
TargetP
other 9  (predict for NP_196805.2)
Gene coexpression
Network*for
coexpressed
genes
LCNloc
[Cytoscape]
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ath03040 Spliceosome 4
Genes directly connected with EMB3011 on the network
coex z* Locus Function* Coexpression
detail		 Entrez Gene ID*
11.3 CDC5 cell division cycle 5 [detail] 837506
10.9 FIP1[V] FIP1[V]-like protein [detail] 835916
10.7 TGH SWAP (Suppressor-of-White-APricot)/surp domain-containing protein [detail] 832372
10.4 AT4G02480 AAA-type ATPase family protein [detail] 827979
10.0 TTA2 fibronectin type III domain protein (DUF1423) [detail] 825525
9.7 AT1G04300 TRAF-like superfamily protein [detail] 839551
8.8 AT1G27752 Ubiquitin system component Cue protein [detail] 5007732
7.9 TPP2 tripeptidyl peptidase ii [detail] 827833
7.0 PPI1 proton pump interactor 1 [detail] 828859
5.4 RAD4 DNA repair protein Rad4 family [detail] 831525
Coexpressed
gene list		 [Coexpressed gene list for EMB3011]
Gene expression
All samples [Expression pattern for all samples]
AtGenExpress*
(Development)
250273_at
250273_at.png

X axis is samples (pdf file), and Y axis is log2-expression.
"1st Q", "mean" and "3rd Q" indecate the values for all genes on a GeneChip. Q: quartile.

AtGenExpress*
(Stress)
250273_at
250273_at.png

X axis is samples (pdf file), and Y axis is log2-expression.
AtGenExpress*
(Hormone)
250273_at
250273_at.png

X axis is samples (xls file), and Y axis is log-expression.
Link to other DBs
Entrez Gene ID 831141      
Refseq ID (protein) NP_196805.2 


The preparation time of this page was 0.2 [sec].